HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:77.4 nTPM
HPA Brain:52.8 nTPM
GTEx:77.4 nTPM
FANTOM5:29.2 Scaled Tags Per Million
Pig:70.0 nTPM
Mouse:75.4 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.8
Sample id Sample description nTPM
Hippocampus
nTPM: 48.4
1898 Male, age 80, left hemisphere 63.5
1855 Male, age 76, left hemisphere 51.1
2621 Female, age 67, right hemisphere 49.4
2529 Female, age 94, left hemisphere 42.6
1911 Female, age 85, right hemisphere 41.9
2148 Female, age 91, left hemisphere 41.8
Dentate gyrus
nTPM: 48.6
2530 Female, age 94, left hemisphere 72.2
2010 Male, age 76, both hemispheres 53.0
1927 Female, age 91, both hemispheres 48.2
2246 Female, age 85, both hemispheres 44.0
2528 Male, age 74, both hemispheres 41.8
2531 Female, age 67, both hemispheres 32.6
Entorhinal gyrus
nTPM: 52.8
2764 Male, age 80, right hemisphere 63.9
2117 Female, age 91, right hemisphere 59.1
2613 Female, age 94, left hemisphere 55.8
1938 Female, age 85, left hemisphere 53.6
1787 Male, age 76, left hemisphere 50.2
2686 Male, age 75, right hemisphere 34.1
Hippocampus, CA1
nTPM: 50.9
2749 Male, age 80, left hemisphere 76.6
2045 Male, age 76, both hemispheres 50.7
1873 Female, age 85, both hemispheres 47.1
2527 Male, age 74, both hemispheres 42.1
2082 Female, age 91, right hemisphere 38.2
Hippocampus, CA2
nTPM: 52.3
1963 Male, age 80, left hemisphere 67.7
1892 Male, age 76, both hemispheres 58.5
1940 Female, age 85, left hemisphere 52.2
2437 Female, age 94, left hemisphere 50.9
2249 Male, age 74, both hemispheres 47.6
2113 Female, age 91, right hemisphere 37.0
Hippocampus, CA3
nTPM: 45.8
1867 Male, age 76, both hemispheres 56.5
2137 Male, age 80, left hemisphere 54.2
1891 Female, age 85, both hemispheres 44.9
2620 Female, age 94, left hemisphere 42.5
2436 Male, age 74, both hemispheres 41.9
2861 Female, age 67, both hemispheres 34.9
Parahippocampal cortex
nTPM: 46.7
1933 Female, age 85, both hemispheres 54.7
1850 Male, age 80, both hemispheres 52.6
1990 Female, age 91, right hemisphere 50.2
2245 Female, age 91, both hemispheres 50.2
2018 Male, age 76, both hemispheres 47.8
2532 Female, age 72, left hemisphere 47.3
2692 Male, age 74, both hemispheres 44.8
2693 Female, age 94, both hemispheres 43.6
2250 Female, age 67, right hemisphere 42.5
2622 Female, age 67, right hemisphere 32.9
Perirhinal gyrus
nTPM: 52.2
1794 Male, age 80, right hemisphere 62.8
1847 Female, age 91, left hemisphere 56.2
2521 Female, age 94, right hemisphere 49.3
1841 Female, age 85, right hemisphere 48.9
2848 Male, age 76, right hemisphere 43.6
Subiculum
nTPM: 49.8
1977 Female, age 85, both hemispheres 58.4
1901 Male, age 80, both hemispheres 58.3
2042 Male, age 76, both hemispheres 57.2
2438 Female, age 94, left hemisphere 45.8
2619 Male, age 74, both hemispheres 40.9
2729 Female, age 91, right hemisphere 38.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 77.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.4
Samples: 197

Max nTPM: 159.3
Min nTPM: 25.0
Std nTPM: 18.3
Median nTPM: 75.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 159.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 133.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 122.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 121.3
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 118.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 111.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 111.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 110.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 106.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 106.7
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 105.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.2
FF:10169-103B7 60 years, female 30.1
FF:10153-102I9 76 years, female 28.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.0
Pig sample Sample description nTPM
Subiculum
nTPM: 53.7
Samples: 4

Max nTPM: 62.1
Min nTPM: 47.4
Sample A Female 62.1
Sample B Female 47.4
Sample C Male 53.7
Sample D Male 51.4
Dorsal hippocampus
nTPM: 70.0
Samples: 4

Max nTPM: 87.6
Min nTPM: 57.2
Sample A Female 87.6
Sample B Female 69.6
Sample C Male 65.6
Sample D Male 57.2
Entorhinal cortex
nTPM: 59.7
Samples: 4

Max nTPM: 63.1
Min nTPM: 54.6
Sample A Female 61.6
Sample B Female 63.1
Sample C Male 59.5
Sample D Male 54.6
Ventral hippocampus
nTPM: 63.0
Samples: 4

Max nTPM: 78.9
Min nTPM: 47.8
Sample A Female 59.4
Sample B Female 47.8
Sample C Male 65.9
Sample D Male 78.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 75.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 69.0
Samples: 4

Max nTPM: 72.9
Min nTPM: 65.8
Sample A Male 67.4
Sample B Male 72.9
Sample C Female 65.8
Sample D Female 69.8
Hippocampal formation
nTPM: 75.5
Samples: 4

Max nTPM: 78.4
Min nTPM: 74.2
Sample A Male 75.0
Sample B Male 74.2
Sample C Female 74.2
Sample D Female 78.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71724654 Antisense, RP_050921_01_D05, Mouse strain C57BL/6J (56 days, male) 0.2

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