HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:22.4 nTPM
HPA Brain:30.3 nTPM
GTEx:22.4 nTPM
FANTOM5:46.5 Scaled Tags Per Million
Pig:17.4 nTPM
Mouse:12.6 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042299
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.3
Sample id Sample description nTPM
Hippocampus
nTPM: 26.3
2529 Female, age 94, left hemisphere 27.4
2148 Female, age 91, left hemisphere 27.3
1898 Male, age 80, left hemisphere 26.6
2621 Female, age 67, right hemisphere 26.4
1911 Female, age 85, right hemisphere 26.1
1855 Male, age 76, left hemisphere 24.0
Dentate gyrus
nTPM: 26.7
2530 Female, age 94, left hemisphere 29.3
2010 Male, age 76, both hemispheres 29.1
1927 Female, age 91, both hemispheres 27.9
2528 Male, age 74, both hemispheres 26.2
2246 Female, age 85, both hemispheres 24.4
2531 Female, age 67, both hemispheres 23.3
Entorhinal gyrus
nTPM: 28.8
2764 Male, age 80, right hemisphere 31.2
1938 Female, age 85, left hemisphere 30.7
2117 Female, age 91, right hemisphere 30.4
2686 Male, age 75, right hemisphere 27.7
1787 Male, age 76, left hemisphere 27.3
2613 Female, age 94, left hemisphere 25.5
Hippocampus, CA1
nTPM: 26.7
2749 Male, age 80, left hemisphere 30.7
2082 Female, age 91, right hemisphere 27.0
2045 Male, age 76, both hemispheres 26.5
1873 Female, age 85, both hemispheres 25.6
2527 Male, age 74, both hemispheres 23.5
Hippocampus, CA2
nTPM: 27.5
1892 Male, age 76, both hemispheres 31.5
2249 Male, age 74, both hemispheres 29.4
2113 Female, age 91, right hemisphere 26.8
1940 Female, age 85, left hemisphere 26.6
1963 Male, age 80, left hemisphere 25.6
2437 Female, age 94, left hemisphere 25.4
Hippocampus, CA3
nTPM: 27.4
1867 Male, age 76, both hemispheres 29.1
2861 Female, age 67, both hemispheres 28.3
2620 Female, age 94, left hemisphere 28.0
1891 Female, age 85, both hemispheres 26.6
2137 Male, age 80, left hemisphere 26.6
2436 Male, age 74, both hemispheres 26.0
Parahippocampal cortex
nTPM: 27.3
1850 Male, age 80, both hemispheres 30.0
1990 Female, age 91, right hemisphere 29.4
1933 Female, age 85, both hemispheres 29.1
2245 Female, age 91, both hemispheres 28.8
2693 Female, age 94, both hemispheres 28.4
2018 Male, age 76, both hemispheres 26.9
2622 Female, age 67, right hemisphere 26.6
2692 Male, age 74, both hemispheres 25.2
2250 Female, age 67, right hemisphere 24.9
2532 Female, age 72, left hemisphere 23.9
Perirhinal gyrus
nTPM: 30.3
1794 Male, age 80, right hemisphere 35.8
2848 Male, age 76, right hemisphere 32.6
1847 Female, age 91, left hemisphere 31.1
1841 Female, age 85, right hemisphere 27.7
2521 Female, age 94, right hemisphere 24.3
Subiculum
nTPM: 27.4
2438 Female, age 94, left hemisphere 31.4
1977 Female, age 85, both hemispheres 27.6
2619 Male, age 74, both hemispheres 27.2
2729 Female, age 91, right hemisphere 26.7
2042 Male, age 76, both hemispheres 26.2
1901 Male, age 80, both hemispheres 25.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 197

Max nTPM: 38.1
Min nTPM: 5.7
Std nTPM: 4.5
Median nTPM: 22.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 38.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 37.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 33.1
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 32.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 32.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 32.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 31.6
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 30.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 30.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 29.8
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 29.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.5
FF:10153-102I9 76 years, female 47.3
FF:10169-103B7 60 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.4
Pig sample Sample description nTPM
Subiculum
nTPM: 17.1
Samples: 4

Max nTPM: 18.9
Min nTPM: 15.2
Sample A Female 17.1
Sample B Female 17.0
Sample C Male 18.9
Sample D Male 15.2
Dorsal hippocampus
nTPM: 16.1
Samples: 4

Max nTPM: 17.3
Min nTPM: 15.6
Sample A Female 15.6
Sample B Female 17.3
Sample C Male 15.6
Sample D Male 15.7
Entorhinal cortex
nTPM: 17.4
Samples: 4

Max nTPM: 19.4
Min nTPM: 14.7
Sample A Female 19.4
Sample B Female 14.7
Sample C Male 17.6
Sample D Male 17.9
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 19.8
Min nTPM: 15.1
Sample A Female 15.1
Sample B Female 15.7
Sample C Male 19.8
Sample D Male 16.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.7
Samples: 4

Max nTPM: 13.3
Min nTPM: 10.9
Sample A Male 13.3
Sample B Male 11.4
Sample C Female 11.2
Sample D Female 10.9
Hippocampal formation
nTPM: 12.6
Samples: 4

Max nTPM: 14.4
Min nTPM: 11.8
Sample A Male 12.1
Sample B Male 11.8
Sample C Female 14.4
Sample D Female 12.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70228089 Antisense, RP_050524_02_G05, Mouse strain C57BL/6J (56 days, male) 0.2

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