HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:33.2 nTPM
HPA Brain:76.0 nTPM
GTEx:33.2 nTPM
FANTOM5:94.3 Scaled Tags Per Million
Pig:73.4 nTPM
Mouse:123.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045174Antibody CAB032821
Glial cells LowLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.0
Sample id Sample description nTPM
Hippocampus
nTPM: 65.1
1898 Male, age 80, left hemisphere 92.2
2529 Female, age 94, left hemisphere 66.8
2621 Female, age 67, right hemisphere 62.8
2148 Female, age 91, left hemisphere 61.7
1855 Male, age 76, left hemisphere 58.8
1911 Female, age 85, right hemisphere 48.5
Dentate gyrus
nTPM: 62.2
2528 Male, age 74, both hemispheres 77.2
1927 Female, age 91, both hemispheres 69.1
2010 Male, age 76, both hemispheres 66.7
2246 Female, age 85, both hemispheres 59.1
2530 Female, age 94, left hemisphere 58.5
2531 Female, age 67, both hemispheres 42.3
Entorhinal gyrus
nTPM: 64.2
2764 Male, age 80, right hemisphere 77.9
2117 Female, age 91, right hemisphere 74.6
1938 Female, age 85, left hemisphere 73.5
1787 Male, age 76, left hemisphere 63.3
2613 Female, age 94, left hemisphere 58.5
2686 Male, age 75, right hemisphere 37.6
Hippocampus, CA1
nTPM: 70.7
2749 Male, age 80, left hemisphere 102.4
1873 Female, age 85, both hemispheres 72.0
2527 Male, age 74, both hemispheres 69.8
2082 Female, age 91, right hemisphere 60.7
2045 Male, age 76, both hemispheres 48.4
Hippocampus, CA2
nTPM: 71.0
2249 Male, age 74, both hemispheres 89.2
1963 Male, age 80, left hemisphere 82.7
1892 Male, age 76, both hemispheres 79.2
1940 Female, age 85, left hemisphere 61.2
2113 Female, age 91, right hemisphere 60.4
2437 Female, age 94, left hemisphere 53.5
Hippocampus, CA3
nTPM: 61.4
2436 Male, age 74, both hemispheres 79.4
2137 Male, age 80, left hemisphere 70.6
1867 Male, age 76, both hemispheres 65.1
1891 Female, age 85, both hemispheres 52.0
2861 Female, age 67, both hemispheres 50.7
2620 Female, age 94, left hemisphere 50.3
Parahippocampal cortex
nTPM: 59.8
1850 Male, age 80, both hemispheres 80.9
1933 Female, age 85, both hemispheres 69.2
1990 Female, age 91, right hemisphere 63.9
2532 Female, age 72, left hemisphere 63.3
2245 Female, age 91, both hemispheres 60.6
2250 Female, age 67, right hemisphere 59.8
2018 Male, age 76, both hemispheres 52.5
2622 Female, age 67, right hemisphere 49.6
2692 Male, age 74, both hemispheres 49.4
2693 Female, age 94, both hemispheres 49.4
Perirhinal gyrus
nTPM: 76.0
1847 Female, age 91, left hemisphere 90.5
1794 Male, age 80, right hemisphere 83.5
1841 Female, age 85, right hemisphere 73.6
2848 Male, age 76, right hemisphere 68.0
2521 Female, age 94, right hemisphere 64.2
Subiculum
nTPM: 58.7
1977 Female, age 85, both hemispheres 67.6
2619 Male, age 74, both hemispheres 67.0
2729 Female, age 91, right hemisphere 62.0
1901 Male, age 80, both hemispheres 61.1
2042 Male, age 76, both hemispheres 47.5
2438 Female, age 94, left hemisphere 47.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.2
Samples: 197

Max nTPM: 59.1
Min nTPM: 14.9
Std nTPM: 8.6
Median nTPM: 32.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 59.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 57.3
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 55.5
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 53.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 52.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 52.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 50.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 50.3
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 50.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 49.1
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 47.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.3
FF:10169-103B7 60 years, female 97.6
FF:10153-102I9 76 years, female 91.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.4
Pig sample Sample description nTPM
Subiculum
nTPM: 66.7
Samples: 4

Max nTPM: 80.0
Min nTPM: 59.9
Sample A Female 80.0
Sample B Female 60.9
Sample C Male 65.9
Sample D Male 59.9
Dorsal hippocampus
nTPM: 73.4
Samples: 4

Max nTPM: 89.7
Min nTPM: 51.5
Sample A Female 89.7
Sample B Female 73.1
Sample C Male 79.4
Sample D Male 51.5
Entorhinal cortex
nTPM: 58.7
Samples: 4

Max nTPM: 63.2
Min nTPM: 52.0
Sample A Female 63.1
Sample B Female 56.4
Sample C Male 63.2
Sample D Male 52.0
Ventral hippocampus
nTPM: 70.5
Samples: 4

Max nTPM: 87.9
Min nTPM: 48.8
Sample A Female 73.8
Sample B Female 48.8
Sample C Male 87.9
Sample D Male 71.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 123.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 120.1
Samples: 4

Max nTPM: 131.5
Min nTPM: 114.7
Sample A Male 116.8
Sample B Male 114.7
Sample C Female 117.5
Sample D Female 131.5
Hippocampal formation
nTPM: 123.5
Samples: 4

Max nTPM: 134.9
Min nTPM: 118.7
Sample A Male 120.7
Sample B Male 119.5
Sample C Female 134.9
Sample D Female 118.7

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