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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
157.6
nTPM
GTEx:
157.6
nTPM
FANTOM5:
154.4
Scaled Tags Per Million
Pig:
127.6
nTPM
Mouse:
343.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
157.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 157.6
Samples: 105
Max nTPM: 244.6
Min nTPM: 50.5
Std nTPM: 46.9
Median nTPM:
172_1
72 years, female
244.6
352_1
62 years, male
242.8
319_1
81 years, male
240.8
177_1
74 years, male
233.3
375_1
74 years, female
227.6
425_1
59 years, female
225.8
6_1
73 years, female
225.3
246_1
77 years, male
224.1
386_1
76 years, male
220.9
163_1
78 years, male
220.7
237_1
82 years, male
219.7
115_1
83 years, male
216.2
9_1
66 years, female
211.8
126_1
63 years, male
211.7
229_1
69 years, female
210.7
389_1
86 years, female
208.6
321_1
62 years, female
205.5
503_1
68 years, male
204.5
347_1
72 years, male
203.9
526_1
61 years, male
203.1
35_1
74 years, female
202.0
335_1
73 years, female
201.8
404_1
82 years, female
200.4
406_1
79 years, male
199.1
243_1
75 years, male
198.0
376_1
75 years, female
196.8
189_1
76 years, male
195.3
355_1
70 years, female
195.3
292_1
71 years, male
195.2
468_1
89 years, male
190.9
447_1
81 years, male
189.7
349_1
83 years, male
188.2
251_1
78 years, male
184.8
218_1
71 years, female
181.4
480_1
63 years, male
181.2
153_1
70 years, female
180.5
324_1
76 years, male
179.9
350_1
84 years, female
178.8
384_1
83 years, male
178.6
396_1
62 years, male
178.0
394_1
75 years, female
177.5
18_1
88 years, male
173.0
354_1
81 years, female
173.0
377_1
82 years, female
172.3
405_1
91 years, male
171.1
517_1
88 years, male
167.8
356_1
87 years, female
167.3
217_1
76 years, male
167.0
286_1
68 years, female
165.9
291_1
76 years, male
165.1
318_1
68 years, male
164.9
353_1
82 years, female
164.2
320_1
89 years, female
163.1
379_1
60 years, male
162.9
265_1
87 years, male
162.3
117_1
61 years, male
161.8
518_1
75 years, female
161.4
145_1
84 years, male
160.3
499_1
55 years, female
157.1
293_1
68 years, female
156.9
348_1
84 years, male
153.4
32_1
67 years, male
149.9
351_1
91 years, male
149.7
137_1
83 years, male
147.7
316_1
62 years, male
147.1
506_1
65 years, male
141.8
81_1
67 years, male
141.7
266_1
85 years, male
140.0
99_1
64 years, male
137.2
173_1
67 years, male
134.8
254_1
77 years, female
133.7
415_1
77 years, female
132.3
17_1
71 years, male
131.6
313_1
79 years, female
129.2
311_1
78 years, male
123.9
142_1
61 years, female
123.2
162_1
79 years, female
122.5
43_1
64 years, female
120.5
288_1
66 years, female
119.7
264_1
73 years, female
119.4
322_1
76 years, male
119.0
120_1
70 years, female
118.7
414_1
84 years, female
117.6
139_1
64 years, female
116.8
42_1
85 years, male
114.2
295_1
61 years, female
114.0
109_1
81 years, female
109.0
315_1
62 years, female
108.0
4_1
88 years, female
106.8
307_1
66 years, female
106.1
452_1
88 years, female
105.8
490_1
67 years, female
101.2
314_1
67 years, male
93.3
466_1
57 years, female
93.2
317_1
60 years, male
90.5
119_1
70 years, female
90.2
149_1
88 years, male
87.8
2_1
77 years, female
82.4
413_1
59 years, female
81.8
89_1
63 years, male
75.2
41_1
94 years, female
74.6
501_1
88 years, male
72.4
308_1
70 years, female
56.5
491_1
89 years, female
51.6
495_1
57 years, female
50.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.