HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:139.3 nTPM
HPA Brain:239.5 nTPM
GTEx:139.3 nTPM
FANTOM5:216.1 Scaled Tags Per Million
Pig:132.8 nTPM
Mouse:71.7 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042394
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 239.5
Sample id Sample description nTPM
Hippocampus
nTPM: 172.7
1898 Male, age 80, left hemisphere 245.7
1855 Male, age 76, left hemisphere 201.5
2621 Female, age 67, right hemisphere 200.5
2148 Female, age 91, left hemisphere 154.9
2529 Female, age 94, left hemisphere 120.6
1911 Female, age 85, right hemisphere 112.9
Dentate gyrus
nTPM: 191.4
1927 Female, age 91, both hemispheres 252.2
2530 Female, age 94, left hemisphere 250.4
2010 Male, age 76, both hemispheres 188.3
2246 Female, age 85, both hemispheres 156.3
2531 Female, age 67, both hemispheres 155.9
2528 Male, age 74, both hemispheres 145.0
Entorhinal gyrus
nTPM: 167.0
2764 Male, age 80, right hemisphere 216.5
2613 Female, age 94, left hemisphere 204.9
1938 Female, age 85, left hemisphere 188.6
1787 Male, age 76, left hemisphere 164.5
2686 Male, age 75, right hemisphere 116.4
2117 Female, age 91, right hemisphere 110.9
Hippocampus, CA1
nTPM: 215.0
2749 Male, age 80, left hemisphere 370.0
2082 Female, age 91, right hemisphere 207.0
1873 Female, age 85, both hemispheres 173.1
2045 Male, age 76, both hemispheres 169.8
2527 Male, age 74, both hemispheres 155.3
Hippocampus, CA2
nTPM: 198.1
1892 Male, age 76, both hemispheres 248.4
1963 Male, age 80, left hemisphere 241.2
2437 Female, age 94, left hemisphere 214.2
2249 Male, age 74, both hemispheres 174.1
2113 Female, age 91, right hemisphere 157.9
1940 Female, age 85, left hemisphere 152.7
Hippocampus, CA3
nTPM: 205.7
2137 Male, age 80, left hemisphere 289.6
2861 Female, age 67, both hemispheres 235.2
2436 Male, age 74, both hemispheres 198.0
1867 Male, age 76, both hemispheres 194.4
2620 Female, age 94, left hemisphere 191.1
1891 Female, age 85, both hemispheres 125.8
Parahippocampal cortex
nTPM: 170.7
2250 Female, age 67, right hemisphere 212.1
1850 Male, age 80, both hemispheres 204.5
1990 Female, age 91, right hemisphere 196.2
2245 Female, age 91, both hemispheres 195.2
2693 Female, age 94, both hemispheres 169.3
1933 Female, age 85, both hemispheres 162.5
2622 Female, age 67, right hemisphere 155.4
2532 Female, age 72, left hemisphere 154.9
2018 Male, age 76, both hemispheres 150.3
2692 Male, age 74, both hemispheres 106.8
Perirhinal gyrus
nTPM: 239.5
1847 Female, age 91, left hemisphere 339.6
1794 Male, age 80, right hemisphere 260.3
2521 Female, age 94, right hemisphere 242.8
1841 Female, age 85, right hemisphere 192.7
2848 Male, age 76, right hemisphere 162.3
Subiculum
nTPM: 148.8
1977 Female, age 85, both hemispheres 185.4
2438 Female, age 94, left hemisphere 182.9
1901 Male, age 80, both hemispheres 173.1
2619 Male, age 74, both hemispheres 122.2
2729 Female, age 91, right hemisphere 115.1
2042 Male, age 76, both hemispheres 114.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 139.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 139.3
Samples: 197

Max nTPM: 417.4
Min nTPM: 20.7
Std nTPM: 72.3
Median nTPM: 130.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 417.4
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 327.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 326.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 313.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 298.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 297.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 295.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 286.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 285.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 274.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 271.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 216.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 216.1
FF:10169-103B7 60 years, female 267.9
FF:10153-102I9 76 years, female 164.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 132.8
Pig sample Sample description nTPM
Subiculum
nTPM: 125.9
Samples: 4

Max nTPM: 153.5
Min nTPM: 110.0
Sample A Female 153.5
Sample B Female 110.0
Sample C Male 128.5
Sample D Male 111.6
Dorsal hippocampus
nTPM: 111.4
Samples: 4

Max nTPM: 140.8
Min nTPM: 75.5
Sample A Female 140.8
Sample B Female 122.1
Sample C Male 107.2
Sample D Male 75.5
Entorhinal cortex
nTPM: 123.7
Samples: 4

Max nTPM: 133.4
Min nTPM: 115.3
Sample A Female 133.4
Sample B Female 115.3
Sample C Male 126.5
Sample D Male 119.4
Ventral hippocampus
nTPM: 132.8
Samples: 4

Max nTPM: 182.7
Min nTPM: 88.7
Sample A Female 131.5
Sample B Female 88.7
Sample C Male 182.7
Sample D Male 128.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 71.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.7
Samples: 4

Max nTPM: 79.6
Min nTPM: 68.1
Sample A Male 69.3
Sample B Male 68.1
Sample C Female 69.8
Sample D Female 79.6
Hippocampal formation
nTPM: 65.7
Samples: 4

Max nTPM: 72.0
Min nTPM: 62.0
Sample A Male 63.6
Sample B Male 62.0
Sample C Female 65.0
Sample D Female 72.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
68798085 Antisense, RP_050215_01_G03, Mouse strain C57BL/6J (56 days, male) 5.2

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