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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
54.8
nTPM
GTEx:
54.8
nTPM
FANTOM5:
128.4
Scaled Tags Per Million
Pig:
49.4
nTPM
Mouse:
76.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
54.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 54.8
Samples: 105
Max nTPM: 93.3
Min nTPM: 8.6
Std nTPM: 16.5
Median nTPM:
506_1
65 years, male
93.3
319_1
81 years, male
88.9
320_1
89 years, female
86.3
376_1
75 years, female
83.7
243_1
75 years, male
83.3
153_1
70 years, female
80.2
18_1
88 years, male
79.5
293_1
68 years, female
79.0
17_1
71 years, male
78.8
163_1
78 years, male
78.8
115_1
83 years, male
77.8
6_1
73 years, female
75.6
377_1
82 years, female
74.9
292_1
71 years, male
72.8
318_1
68 years, male
72.5
352_1
62 years, male
72.0
503_1
68 years, male
72.0
425_1
59 years, female
71.9
452_1
88 years, female
70.7
177_1
74 years, male
70.4
172_1
72 years, female
70.1
386_1
76 years, male
69.8
335_1
73 years, female
68.8
321_1
62 years, female
67.4
356_1
87 years, female
65.1
145_1
84 years, male
64.7
254_1
77 years, female
64.7
2_1
77 years, female
64.5
322_1
76 years, male
64.3
406_1
79 years, male
64.3
316_1
62 years, male
63.7
120_1
70 years, female
63.1
480_1
63 years, male
62.7
517_1
88 years, male
62.2
189_1
76 years, male
62.1
349_1
83 years, male
61.9
353_1
82 years, female
60.3
264_1
73 years, female
60.1
404_1
82 years, female
60.1
518_1
75 years, female
59.9
126_1
63 years, male
59.7
288_1
66 years, female
59.5
109_1
81 years, female
59.4
251_1
78 years, male
59.4
4_1
88 years, female
58.7
9_1
66 years, female
57.9
295_1
61 years, female
57.9
351_1
91 years, male
56.4
350_1
84 years, female
56.2
394_1
75 years, female
55.9
142_1
61 years, female
55.6
286_1
68 years, female
55.4
246_1
77 years, male
54.4
137_1
83 years, male
54.3
229_1
69 years, female
54.3
396_1
62 years, male
54.1
405_1
91 years, male
53.9
99_1
64 years, male
53.3
526_1
61 years, male
53.0
265_1
87 years, male
51.8
348_1
84 years, male
51.7
379_1
60 years, male
51.7
237_1
82 years, male
51.4
313_1
79 years, female
50.6
413_1
59 years, female
50.4
499_1
55 years, female
49.0
35_1
74 years, female
48.7
81_1
67 years, male
48.3
266_1
85 years, male
47.9
354_1
81 years, female
47.6
389_1
86 years, female
47.6
117_1
61 years, male
47.3
291_1
76 years, male
46.4
32_1
67 years, male
46.1
173_1
67 years, male
45.8
317_1
60 years, male
45.8
468_1
89 years, male
45.6
324_1
76 years, male
45.5
375_1
74 years, female
45.3
355_1
70 years, female
44.7
139_1
64 years, female
44.3
217_1
76 years, male
44.3
42_1
85 years, male
44.2
447_1
81 years, male
44.0
501_1
88 years, male
44.0
384_1
83 years, male
43.2
41_1
94 years, female
43.1
347_1
72 years, male
42.4
314_1
67 years, male
39.5
43_1
64 years, female
35.2
315_1
62 years, female
34.6
311_1
78 years, male
34.5
162_1
79 years, female
34.2
119_1
70 years, female
33.5
466_1
57 years, female
32.6
218_1
71 years, female
31.2
89_1
63 years, male
30.6
149_1
88 years, male
29.3
307_1
66 years, female
29.3
415_1
77 years, female
25.6
495_1
57 years, female
24.2
414_1
84 years, female
23.1
491_1
89 years, female
16.6
490_1
67 years, female
16.5
308_1
70 years, female
8.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
