HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:62.4 nTPM
HPA Brain:121.7 nTPM
GTEx:62.4 nTPM
FANTOM5:162.1 Scaled Tags Per Million
Pig:92.7 nTPM
Mouse:57.4 nTPM
Allen mouse:8.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018883
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 121.7
Sample id Sample description nTPM
Hippocampus
nTPM: 111.8
2621 Female, age 67, right hemisphere 131.6
2529 Female, age 94, left hemisphere 117.8
1898 Male, age 80, left hemisphere 111.0
1855 Male, age 76, left hemisphere 106.8
2148 Female, age 91, left hemisphere 102.2
1911 Female, age 85, right hemisphere 101.2
Dentate gyrus
nTPM: 107.1
2530 Female, age 94, left hemisphere 124.7
2010 Male, age 76, both hemispheres 112.4
2531 Female, age 67, both hemispheres 106.7
2246 Female, age 85, both hemispheres 105.4
1927 Female, age 91, both hemispheres 101.3
2528 Male, age 74, both hemispheres 92.2
Entorhinal gyrus
nTPM: 117.1
2613 Female, age 94, left hemisphere 127.9
2686 Male, age 75, right hemisphere 126.9
2764 Male, age 80, right hemisphere 121.1
1938 Female, age 85, left hemisphere 112.3
2117 Female, age 91, right hemisphere 109.2
1787 Male, age 76, left hemisphere 105.1
Hippocampus, CA1
nTPM: 109.0
2749 Male, age 80, left hemisphere 123.1
1873 Female, age 85, both hemispheres 113.8
2045 Male, age 76, both hemispheres 109.1
2082 Female, age 91, right hemisphere 103.3
2527 Male, age 74, both hemispheres 95.5
Hippocampus, CA2
nTPM: 102.3
1963 Male, age 80, left hemisphere 106.8
1892 Male, age 76, both hemispheres 106.0
2113 Female, age 91, right hemisphere 105.2
2437 Female, age 94, left hemisphere 101.6
1940 Female, age 85, left hemisphere 100.2
2249 Male, age 74, both hemispheres 94.0
Hippocampus, CA3
nTPM: 121.7
2620 Female, age 94, left hemisphere 158.9
2861 Female, age 67, both hemispheres 140.1
1867 Male, age 76, both hemispheres 119.5
2137 Male, age 80, left hemisphere 118.9
1891 Female, age 85, both hemispheres 102.0
2436 Male, age 74, both hemispheres 91.0
Parahippocampal cortex
nTPM: 113.1
2622 Female, age 67, right hemisphere 136.6
2692 Male, age 74, both hemispheres 128.2
2245 Female, age 91, both hemispheres 120.2
2018 Male, age 76, both hemispheres 116.6
1850 Male, age 80, both hemispheres 115.3
2532 Female, age 72, left hemisphere 113.4
1990 Female, age 91, right hemisphere 103.3
1933 Female, age 85, both hemispheres 100.9
2693 Female, age 94, both hemispheres 100.8
2250 Female, age 67, right hemisphere 96.1
Perirhinal gyrus
nTPM: 109.1
1794 Male, age 80, right hemisphere 124.5
1841 Female, age 85, right hemisphere 108.4
2848 Male, age 76, right hemisphere 108.1
1847 Female, age 91, left hemisphere 106.6
2521 Female, age 94, right hemisphere 98.0
Subiculum
nTPM: 117.6
2619 Male, age 74, both hemispheres 133.1
2042 Male, age 76, both hemispheres 131.8
2438 Female, age 94, left hemisphere 129.0
1901 Male, age 80, both hemispheres 115.2
1977 Female, age 85, both hemispheres 102.1
2729 Female, age 91, right hemisphere 94.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.4
Samples: 197

Max nTPM: 106.1
Min nTPM: 29.0
Std nTPM: 10.6
Median nTPM: 61.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 106.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 92.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 92.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 88.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 85.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 85.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 84.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 84.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 83.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 82.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 81.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 162.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 162.1
FF:10153-102I9 76 years, female 195.5
FF:10169-103B7 60 years, female 128.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.7
Pig sample Sample description nTPM
Subiculum
nTPM: 87.3
Samples: 4

Max nTPM: 104.8
Min nTPM: 77.2
Sample A Female 104.8
Sample B Female 77.2
Sample C Male 87.5
Sample D Male 79.5
Dorsal hippocampus
nTPM: 90.8
Samples: 4

Max nTPM: 104.3
Min nTPM: 79.4
Sample A Female 104.3
Sample B Female 89.4
Sample C Male 90.1
Sample D Male 79.4
Entorhinal cortex
nTPM: 83.3
Samples: 4

Max nTPM: 92.8
Min nTPM: 75.8
Sample A Female 92.8
Sample B Female 75.8
Sample C Male 82.6
Sample D Male 81.8
Ventral hippocampus
nTPM: 92.7
Samples: 4

Max nTPM: 109.5
Min nTPM: 74.0
Sample A Female 87.3
Sample B Female 74.0
Sample C Male 109.5
Sample D Male 100.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.3
Samples: 4

Max nTPM: 60.4
Min nTPM: 52.5
Sample A Male 54.3
Sample B Male 52.5
Sample C Female 58.0
Sample D Female 60.4
Hippocampal formation
nTPM: 57.4
Samples: 4

Max nTPM: 61.6
Min nTPM: 54.6
Sample A Male 54.7
Sample B Male 61.6
Sample C Female 58.7
Sample D Female 54.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.8
68668024 Antisense, RP_050203_01_C07, Mouse strain C57BL/6J (56 days, male) 15.3
70813251 Antisense, RP_050712_03_E03, Mouse strain C57BL/6J (56 days, male) 2.3

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