HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:93.5 nTPM
HPA Brain:353.4 nTPM
GTEx:93.5 nTPM
FANTOM5:268.4 Scaled Tags Per Million
Pig:197.0 nTPM
Mouse:70.5 nTPM
Allen mouse:17.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003456
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 353.4
Sample id Sample description nTPM
Hippocampus
nTPM: 320.3
1911 Female, age 85, right hemisphere 365.3
2529 Female, age 94, left hemisphere 351.0
2148 Female, age 91, left hemisphere 328.2
2621 Female, age 67, right hemisphere 312.2
1898 Male, age 80, left hemisphere 290.0
1855 Male, age 76, left hemisphere 275.0
Dentate gyrus
nTPM: 312.2
2530 Female, age 94, left hemisphere 443.7
2010 Male, age 76, both hemispheres 314.4
2246 Female, age 85, both hemispheres 305.9
2531 Female, age 67, both hemispheres 299.9
1927 Female, age 91, both hemispheres 277.8
2528 Male, age 74, both hemispheres 231.4
Entorhinal gyrus
nTPM: 311.5
2686 Male, age 75, right hemisphere 401.9
2117 Female, age 91, right hemisphere 391.1
2613 Female, age 94, left hemisphere 289.2
2764 Male, age 80, right hemisphere 288.6
1938 Female, age 85, left hemisphere 272.4
1787 Male, age 76, left hemisphere 225.7
Hippocampus, CA1
nTPM: 280.4
2749 Male, age 80, left hemisphere 342.8
1873 Female, age 85, both hemispheres 340.5
2527 Male, age 74, both hemispheres 268.8
2082 Female, age 91, right hemisphere 238.7
2045 Male, age 76, both hemispheres 211.2
Hippocampus, CA2
nTPM: 291.0
1963 Male, age 80, left hemisphere 441.1
2113 Female, age 91, right hemisphere 306.4
2437 Female, age 94, left hemisphere 288.6
2249 Male, age 74, both hemispheres 257.5
1892 Male, age 76, both hemispheres 227.9
1940 Female, age 85, left hemisphere 224.7
Hippocampus, CA3
nTPM: 252.5
2137 Male, age 80, left hemisphere 364.4
1891 Female, age 85, both hemispheres 357.3
1867 Male, age 76, both hemispheres 232.9
2861 Female, age 67, both hemispheres 225.4
2620 Female, age 94, left hemisphere 170.8
2436 Male, age 74, both hemispheres 164.3
Parahippocampal cortex
nTPM: 264.3
2532 Female, age 72, left hemisphere 367.6
2692 Male, age 74, both hemispheres 318.1
2245 Female, age 91, both hemispheres 302.2
1850 Male, age 80, both hemispheres 287.9
1990 Female, age 91, right hemisphere 274.1
2018 Male, age 76, both hemispheres 242.2
1933 Female, age 85, both hemispheres 230.3
2622 Female, age 67, right hemisphere 227.4
2250 Female, age 67, right hemisphere 198.2
2693 Female, age 94, both hemispheres 194.7
Perirhinal gyrus
nTPM: 196.0
1794 Male, age 80, right hemisphere 243.2
2848 Male, age 76, right hemisphere 220.0
2521 Female, age 94, right hemisphere 176.8
1841 Female, age 85, right hemisphere 171.2
1847 Female, age 91, left hemisphere 168.7
Subiculum
nTPM: 353.4
2042 Male, age 76, both hemispheres 510.8
2438 Female, age 94, left hemisphere 417.9
1901 Male, age 80, both hemispheres 368.7
1977 Female, age 85, both hemispheres 290.7
2729 Female, age 91, right hemisphere 272.8
2619 Male, age 74, both hemispheres 259.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 93.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 93.5
Samples: 197

Max nTPM: 331.6
Min nTPM: 19.5
Std nTPM: 49.9
Median nTPM: 78.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 331.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 304.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 266.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 246.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 234.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 218.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 205.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 202.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 199.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 192.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 187.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 268.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 268.4
FF:10169-103B7 60 years, female 273.1
FF:10153-102I9 76 years, female 263.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 197.0
Pig sample Sample description nTPM
Subiculum
nTPM: 84.3
Samples: 4

Max nTPM: 95.3
Min nTPM: 79.3
Sample A Female 95.3
Sample B Female 81.5
Sample C Male 79.3
Sample D Male 81.0
Dorsal hippocampus
nTPM: 197.0
Samples: 4

Max nTPM: 241.5
Min nTPM: 150.8
Sample A Female 241.5
Sample B Female 198.1
Sample C Male 197.5
Sample D Male 150.8
Entorhinal cortex
nTPM: 87.7
Samples: 4

Max nTPM: 99.3
Min nTPM: 76.3
Sample A Female 93.3
Sample B Female 99.3
Sample C Male 76.3
Sample D Male 82.0
Ventral hippocampus
nTPM: 143.9
Samples: 4

Max nTPM: 236.9
Min nTPM: 98.9
Sample A Female 134.9
Sample B Female 104.9
Sample C Male 98.9
Sample D Male 236.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.7
Samples: 4

Max nTPM: 44.7
Min nTPM: 34.3
Sample A Male 44.7
Sample B Male 36.1
Sample C Female 39.8
Sample D Female 34.3
Hippocampal formation
nTPM: 70.5
Samples: 4

Max nTPM: 86.0
Min nTPM: 54.5
Sample A Male 54.5
Sample B Male 79.2
Sample C Female 86.0
Sample D Female 62.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.2
68844468 Antisense, RP_050222_01_F10, Mouse strain C57BL/6J (56 days, male) 18.5
71924066 Antisense, RP_051017_02_H07, Mouse strain C57BL/6J (56 days, male) 15.9

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