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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
477.2
nTPM
FANTOM5:
406.4
Scaled Tags Per Million
Pig:
119.6
nTPM
Allen mouse:
4.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
477.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 457.5
2301
Female, age 85, both hemispheres
583.9
2188
Female, age 91, both hemispheres
544.3
2090
Male, age 80, both hemispheres
475.8
1984
Male, age 76, both hemispheres
225.8
Dorsal cochlear nucleus nTPM: 389.4
2187
Female, age 91, both hemispheres
456.4
2378
Male, age 80, both hemispheres
420.9
2802
Male, age 74, right hemisphere
384.4
2058
Male, age 76, both hemispheres
363.1
2370
Male, age 61, both hemispheres
322.2
Dorsal tegmental nucleus nTPM: 362.9
2083
Male, age 80, both hemispheres
399.2
2326
Male, age 74, both hemispheres
396.8
1936
Male, age 76, left hemisphere
332.9
2358
Male, age 61, both hemispheres
322.7
Dorsolateral tegmental area nTPM: 384.6
2337
Male, age 61, both hemispheres
556.1
2654
Male, age 80, both hemispheres
431.1
2751
Female, age 85, both hemispheres
430.8
2360
Male, age 74, both hemispheres
280.7
2141
Male, age 76, both hemispheres
224.5
Kolliker-Fuse nucleus nTPM: 392.5
2793
Female, age 91, left hemisphere
586.2
2163
Male, age 80, both hemispheres
337.1
2315
Male, age 76, right hemisphere
254.3
Lateral lemniscal nuclei nTPM: 366.0
2320
Female, age 91, left hemisphere
504.8
2746
Female, age 85, left hemisphere
360.5
2453
Male, age 74, right hemisphere
329.3
2169
Male, age 76, both hemispheres
324.1
2036
Male, age 80, both hemispheres
311.5
Lateral parabrachial nucleus nTPM: 419.7
2792
Male, age 76, both hemispheres
630.2
2013
Male, age 80, both hemispheres
429.1
2790
Male, age 61, both hemispheres
335.2
2139
Female, age 85, right hemisphere
284.5
Lateral vestibular nucleus nTPM: 426.1
2311
Male, age 80, both hemispheres
486.8
2184
Male, age 76, both hemispheres
365.4
Locus coeruleus nTPM: 220.9
2720
Male, age 74, both hemispheres
333.9
2162
Male, age 80, both hemispheres
308.5
2788
Male, age 74, unknown
205.2
2317
Female, age 72, unknown
193.7
2123
Female, age 91, both hemispheres
179.8
2014
Male, age 55, unknown
164.2
1980
Male, age 76, both hemispheres
161.3
Medial parabrachial nucleus nTPM: 403.9
2170
Female, age 91, both hemispheres
456.3
2854
Male, age 80, both hemispheres
430.9
2786
Male, age 76, both hemispheres
404.7
2463
Female, age 85, right hemisphere
389.0
2156
Male, age 61, both hemispheres
338.5
Medial periolivary nuclei nTPM: 344.0
2081
Male, age 80, both hemispheres
475.8
2458
Female, age 91, both hemispheres
446.3
2791
Male, age 74, right hemisphere
294.9
2063
Male, age 76, both hemispheres
282.5
2171
Female, age 85, both hemispheres
220.5
Motor facial nucleus nTPM: 353.1
2697
Female, age 85, both hemispheres
460.2
2126
Male, age 61, both hemispheres
423.1
2795
Female, age 91, both hemispheres
357.9
2327
Male, age 80, both hemispheres
325.4
2365
Male, age 74, right hemisphere
318.1
2062
Male, age 76, both hemispheres
234.1
Motor trigeminal nucleus nTPM: 395.6
2321
Female, age 91, both hemispheres
512.8
2309
Male, age 76, both hemispheres
423.2
2335
Male, age 61, both hemispheres
351.3
2079
Male, age 80, both hemispheres
348.1
2560
Male, age 74, both hemispheres
342.9
Nuclei of the trapezoid body nTPM: 315.7
2166
Male, age 80, both hemispheres
432.0
2368
Female, age 91, both hemispheres
381.4
1983
Male, age 76, both hemispheres
308.3
2159
Male, age 61, both hemispheres
283.3
2735
Female, age 85, both hemispheres
173.3
Nucleus raphe magnus nTPM: 308.0
2459
Female, age 91, both hemispheres
438.8
2328
Male, age 80, both hemispheres
405.3
2051
Male, age 76, both hemispheres
378.5
2455
Male, age 74, both hemispheres
303.6
2172
Female, age 85, both hemispheres
179.4
2160
Male, age 61, both hemispheres
142.2
Paramedian reticular nucleus nTPM: 384.0
2052
Male, age 76, both hemispheres
596.7
2057
Male, age 80, both hemispheres
332.2
2050
Female, age 85, both hemispheres
315.2
2313
Male, age 61, both hemispheres
292.0
Pedunculopontine tegmental nucleus nTPM: 377.7
2338
Male, age 61, both hemispheres
445.8
2334
Male, age 80, both hemispheres
395.0
1921
Female, age 85, both hemispheres
292.3
Pontine nuclei nTPM: 365.9
2319
Female, age 91, both hemispheres
537.0
2115
Male, age 80, left hemisphere
464.3
2454
Male, age 74, left hemisphere
446.3
1968
Male, age 76, left hemisphere
415.7
2109
Female, age 72, unknown
348.8
1863
Male, age 55, unknown
323.1
2787
Female, age 85, both hemispheres
216.8
2727
Male, age 61, right hemisphere
175.5
Pontine raphe nucleus nTPM: 274.3
2853
Male, age 76, midline
303.8
2122
Female, age 85, midline
244.9
Posteroventral cochlear nucleus nTPM: 477.2
2135
Female, age 91, both hemispheres
610.4
2341
Male, age 80, both hemispheres
558.4
2070
Male, age 76, both hemispheres
506.2
2371
Male, age 61, both hemispheres
402.2
2752
Female, age 85, both hemispheres
309.0
Principal sensory trigeminal nucleus nTPM: 352.0
2367
Female, age 91, left hemisphere
518.1
2324
Male, age 76, both hemispheres
376.9
2008
Male, age 80, left hemisphere
268.1
2158
Male, age 61, both hemispheres
245.0
Reticular pontine nucleus, caudal nTPM: 422.7
2457
Female, age 91, both hemispheres
529.0
2559
Male, age 74, both hemispheres
433.6
2092
Male, age 76, both hemispheres
433.2
2332
Male, age 80, right hemisphere
295.0
Reticular pontine nucleus, oral nTPM: 398.0
2366
Female, age 91, both hemispheres
553.6
2167
Male, age 76, both hemispheres
429.4
1939
Male, age 80, both hemispheres
385.3
2012
Female, age 85, both hemispheres
338.9
2361
Male, age 74, both hemispheres
282.6
Reticulotegmental nucleus nTPM: 365.5
2322
Female, age 91, both hemispheres
417.3
2452
Male, age 74, both hemispheres
398.1
2333
Male, age 80, both hemispheres
373.5
2325
Male, age 76, both hemispheres
273.0
Spinal trigeminal nucleus, oral nTPM: 338.8
2164
Male, age 80, both hemispheres
400.2
1978
Male, age 76, both hemispheres
373.0
2737
Female, age 85, both hemispheres
243.1
Subcoeruleus area nTPM: 387.3
2369
Female, age 85, left hemisphere
512.1
2089
Male, age 76, left hemisphere
408.6
2451
Male, age 74, both hemispheres
401.6
1958
Male, age 80, both hemispheres
315.0
2323
Female, age 91, left hemisphere
299.2
Superior olive nTPM: 381.0
2020
Male, age 76, both hemispheres
468.2
2561
Female, age 91, both hemispheres
451.3
2329
Male, age 80, right hemisphere
433.6
2364
Male, age 74, right hemisphere
303.3
1875
Female, age 85, both hemispheres
248.5
Ventral periolivary nuclei nTPM: 367.7
2023
Male, age 76, both hemispheres
552.0
2794
Female, age 91, left hemisphere
378.8
2165
Male, age 80, both hemispheres
309.6
2130
Female, age 85, both hemispheres
230.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 375.4
2456
Female, age 91, both hemispheres
440.4
2359
Male, age 61, both hemispheres
394.1
2840
Female, age 85, both hemispheres
384.2
2161
Male, age 80, both hemispheres
375.0
1959
Male, age 76, both hemispheres
366.1
2449
Male, age 74, both hemispheres
292.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
119.6
Pig sample
Sample description
nTPM
Pons nTPM: 119.6
Samples: 4
Max nTPM: 154.0
Min nTPM: 98.6
Sample A
Female
99.6
Sample B
Female
98.6
Sample C
Male
126.2
Sample D
Male
154.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
