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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
54.6
nTPM
HPA Brain:
25.6
nTPM
GTEx:
54.6
nTPM
FANTOM5:
25.3
Scaled Tags Per Million
Pig:
7.1
nTPM
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max nTPM
25.6
Sample id
Sample description
nTPM
Amygdala nTPM: 25.6
2514
Male, age 75, right hemisphere
27.4
2695
Female, age 67, right hemisphere
27.2
2814
Male, age 76, right hemisphere
26.4
1987
Female, age 91, left hemisphere
23.8
2517
Female, age 94, left hemisphere
23.4
Basal amygdala nTPM: 20.9
2609
Male, age 75, right hemisphere
27.6
2827
Female, age 67, right hemisphere
21.1
2685
Female, age 94, left hemisphere
20.8
2110
Male, age 80, left hemisphere
19.1
1955
Male, age 76, both hemispheres
18.4
2243
Female, age 91, right hemisphere
18.2
Central amygdala nTPM: 21.5
2826
Female, age 94, left hemisphere
29.3
1905
Male, age 76, both hemispheres
23.1
2515
Male, age 75, right hemisphere
21.2
2239
Male, age 80, left hemisphere
17.0
2701
Female, age 91, right hemisphere
16.7
Corticomedial amygdala nTPM: 18.5
2428
Male, age 75, right hemisphere
22.9
2429
Female, age 94, left hemisphere
20.5
2829
Male, age 80, left hemisphere
20.4
2535
Female, age 67, right hemisphere
16.9
2240
Male, age 76, both hemispheres
16.7
2242
Female, age 91, right hemisphere
13.9
Lateral amygdala nTPM: 23.3
2534
Female, age 94, left hemisphere
27.8
2516
Male, age 75, right hemisphere
25.4
1883
Male, age 76, both hemispheres
23.9
2830
Female, age 67, right hemisphere
22.2
2256
Male, age 80, left hemisphere
22.1
2255
Female, age 91, right hemisphere
18.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
54.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 54.6
Samples: 152
Max nTPM: 216.3
Min nTPM: 25.5
Std nTPM: 20.6
Median nTPM: 50.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
216.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
123.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
106.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
99.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
92.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
91.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
91.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
88.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
88.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
83.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
81.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
79.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
77.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
76.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
76.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
73.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
72.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
70.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
69.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
67.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
67.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
67.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
67.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
67.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
66.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
66.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
66.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
66.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
65.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
65.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
65.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
64.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
64.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
63.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
62.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
62.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
62.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
61.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
61.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
61.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
61.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
61.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
60.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
59.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
59.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
59.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
59.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
58.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
58.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
58.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
57.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
57.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
57.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
56.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
56.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
56.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
56.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
54.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
54.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
54.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
54.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
53.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
53.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
53.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
53.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
53.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
52.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
52.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
51.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
50.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
50.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
50.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
50.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
50.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
50.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
50.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
50.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
50.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
50.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
49.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
49.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
49.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
49.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
49.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
49.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
49.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
48.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
48.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
48.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
48.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
47.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
47.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
47.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
47.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
46.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
46.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
46.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
46.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
45.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
45.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
45.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
45.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
45.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
44.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
44.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
44.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
44.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
44.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
43.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
43.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
43.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
43.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
43.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
43.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
43.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
43.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
43.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
42.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
42.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
42.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
42.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
42.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
41.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
40.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
40.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
40.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
40.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
40.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
40.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
40.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
40.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
40.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
39.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
39.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
38.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
38.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
36.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
36.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
36.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
34.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
34.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
34.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
33.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
33.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
31.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
30.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
30.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
30.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
29.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
27.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
26.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
25.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.