HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:178.8 nTPM
HPA Brain:121.6 nTPM
GTEx:178.8 nTPM
FANTOM5:167.2 Scaled Tags Per Million
Pig:61.9 nTPM
Mouse:288.0 nTPM
Allen mouse:21.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 121.6
Sample id Sample description nTPM
Hippocampus
nTPM: 114.9
1898 Male, age 80, left hemisphere 137.7
2529 Female, age 94, left hemisphere 123.1
1911 Female, age 85, right hemisphere 113.4
2621 Female, age 67, right hemisphere 106.9
1855 Male, age 76, left hemisphere 104.6
2148 Female, age 91, left hemisphere 104.0
Dentate gyrus
nTPM: 107.6
2010 Male, age 76, both hemispheres 125.4
1927 Female, age 91, both hemispheres 115.5
2528 Male, age 74, both hemispheres 114.8
2246 Female, age 85, both hemispheres 103.8
2530 Female, age 94, left hemisphere 103.0
2531 Female, age 67, both hemispheres 83.3
Entorhinal gyrus
nTPM: 104.5
1938 Female, age 85, left hemisphere 124.8
2117 Female, age 91, right hemisphere 122.5
1787 Male, age 76, left hemisphere 110.6
2764 Male, age 80, right hemisphere 109.5
2686 Male, age 75, right hemisphere 85.9
2613 Female, age 94, left hemisphere 73.7
Hippocampus, CA1
nTPM: 121.6
2749 Male, age 80, left hemisphere 142.1
1873 Female, age 85, both hemispheres 120.4
2045 Male, age 76, both hemispheres 119.1
2527 Male, age 74, both hemispheres 118.1
2082 Female, age 91, right hemisphere 108.1
Hippocampus, CA2
nTPM: 118.1
2249 Male, age 74, both hemispheres 136.6
1963 Male, age 80, left hemisphere 130.7
1892 Male, age 76, both hemispheres 122.5
1940 Female, age 85, left hemisphere 110.2
2113 Female, age 91, right hemisphere 108.0
2437 Female, age 94, left hemisphere 100.3
Hippocampus, CA3
nTPM: 113.1
1891 Female, age 85, both hemispheres 129.9
1867 Male, age 76, both hemispheres 128.2
2137 Male, age 80, left hemisphere 122.5
2436 Male, age 74, both hemispheres 119.3
2620 Female, age 94, left hemisphere 97.2
2861 Female, age 67, both hemispheres 81.6
Parahippocampal cortex
nTPM: 105.5
1850 Male, age 80, both hemispheres 125.2
2018 Male, age 76, both hemispheres 120.7
1990 Female, age 91, right hemisphere 117.9
1933 Female, age 85, both hemispheres 116.3
2250 Female, age 67, right hemisphere 114.7
2532 Female, age 72, left hemisphere 101.3
2245 Female, age 91, both hemispheres 99.6
2693 Female, age 94, both hemispheres 91.3
2692 Male, age 74, both hemispheres 91.2
2622 Female, age 67, right hemisphere 76.5
Perirhinal gyrus
nTPM: 119.1
1841 Female, age 85, right hemisphere 136.2
1847 Female, age 91, left hemisphere 130.3
1794 Male, age 80, right hemisphere 125.1
2521 Female, age 94, right hemisphere 102.9
2848 Male, age 76, right hemisphere 100.9
Subiculum
nTPM: 117.4
1977 Female, age 85, both hemispheres 132.9
2042 Male, age 76, both hemispheres 131.5
1901 Male, age 80, both hemispheres 118.8
2729 Female, age 91, right hemisphere 112.5
2619 Male, age 74, both hemispheres 109.4
2438 Female, age 94, left hemisphere 99.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 178.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 178.8
Samples: 197

Max nTPM: 445.4
Min nTPM: 124.4
Std nTPM: 33.0
Median nTPM: 174.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 445.4
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 295.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 258.5
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 246.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 239.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 236.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 236.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 235.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 230.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 228.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 228.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 167.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 167.2
FF:10153-102I9 76 years, female 172.4
FF:10169-103B7 60 years, female 162.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.9
Pig sample Sample description nTPM
Subiculum
nTPM: 59.9
Samples: 4

Max nTPM: 64.0
Min nTPM: 57.0
Sample A Female 64.0
Sample B Female 59.1
Sample C Male 57.0
Sample D Male 59.4
Dorsal hippocampus
nTPM: 61.9
Samples: 4

Max nTPM: 64.6
Min nTPM: 60.0
Sample A Female 64.6
Sample B Female 60.1
Sample C Male 60.0
Sample D Male 63.0
Entorhinal cortex
nTPM: 60.2
Samples: 4

Max nTPM: 67.1
Min nTPM: 57.2
Sample A Female 57.9
Sample B Female 67.1
Sample C Male 58.6
Sample D Male 57.2
Ventral hippocampus
nTPM: 59.5
Samples: 4

Max nTPM: 62.9
Min nTPM: 57.7
Sample A Female 62.9
Sample B Female 59.1
Sample C Male 57.7
Sample D Male 58.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 288.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 280.5
Samples: 4

Max nTPM: 299.2
Min nTPM: 266.0
Sample A Male 274.5
Sample B Male 299.2
Sample C Female 282.1
Sample D Female 266.0
Hippocampal formation
nTPM: 288.0
Samples: 4

Max nTPM: 323.0
Min nTPM: 267.5
Sample A Male 323.0
Sample B Male 278.8
Sample C Female 282.5
Sample D Female 267.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.4
70593287 Antisense, RP_050407_01_G07, Mouse strain C57BL/6J (56 days, male) 21.4

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