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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
212.2
nTPM
HPA Brain:
132.9
nTPM
GTEx:
212.2
nTPM
FANTOM5:
243.7
Scaled Tags Per Million
Pig:
65.7
nTPM
Mouse:
259.1
nTPM
Allen mouse:
13.1
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
132.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 116.9
1870
Female, age 42, unknown
136.4
2019
Male, age 18, unknown
134.9
2411
Female, age 72, unknown
131.7
1827
Male, age 72, unknown
125.6
2828
Female, age 72, unknown
120.8
1833
Male, age 53, unknown
115.4
1830
Male, age 51, unknown
113.5
2586
Male, age 75, left hemisphere
105.1
2219
Male, age 76, both hemispheres
93.0
2666
Male, age 74, left hemisphere
92.2
Dorsal raphe nucleus nTPM: 132.9
2298
Female, age 72, unknown
157.5
1828
Male, age 53, unknown
131.8
2016
Female, age 72, unknown
130.6
2750
Male, age 76, both hemispheres
124.7
2047
Male, age 72, unknown
119.8
Inferior colliculus nTPM: 129.0
2097
Female, age 72, unknown
159.2
1890
Male, age 53, unknown
126.6
1848
Female, age 42, unknown
122.6
2849
Male, age 72, unknown
107.4
Median raphe nucleus nTPM: 110.3
2220
Male, age 76, midline
110.3
Periaquaductal grey, anterior nTPM: 129.5
2502
Female, age 75, unknown
137.1
1947
Male, age 18, unknown
133.8
1795
Male, age 51, unknown
117.5
Periaquaductal grey, dorsal nTPM: 122.3
2850
Male, age 76, both hemispheres
131.7
1840
Male, age 53, unknown
128.3
2464
Female, age 72, unknown
115.3
1831
Male, age 72, unknown
113.9
Periaquaductal grey, lateral nTPM: 123.7
2140
Male, age 76, both hemispheres
126.2
2053
Male, age 18, unknown
126.1
2272
Male, age 74, both hemispheres
118.8
Pretectal area nTPM: 129.9
2273
Male, age 74, both hemispheres
148.4
2667
Female, age 75, unknown
141.3
1817
Female, age 42, unknown
138.7
1816
Male, age 51, unknown
137.9
2224
Female, age 72, unknown
135.3
2007
Male, age 72, unknown
130.8
1944
Female, age 72, unknown
129.6
2316
Male, age 76, right hemisphere
128.7
1815
Male, age 53, unknown
125.3
2825
Male, age 18, unknown
108.3
2407
Male, age 75, both hemispheres
104.3
Red nucleus nTPM: 131.2
1821
Female, age 72, unknown
169.4
1954
Female, age 42, unknown
142.0
1865
Male, age 51, unknown
139.4
2503
Female, age 72, unknown
138.2
1904
Male, age 53, unknown
137.5
2823
Male, age 76, right hemisphere
133.7
2725
Female, age 75, unknown
131.8
2227
Male, age 72, unknown
130.7
2769
Male, age 72, unknown
129.3
2785
Male, age 18, unknown
124.5
2588
Male, age 74, left hemisphere
104.6
2584
Male, age 75, left hemisphere
93.0
Substantia nigra nTPM: 127.5
2241
Male, age 72, unknown
148.8
1916
Female, age 42, unknown
140.6
1851
Male, age 51, unknown
137.9
2409
Female, age 72, unknown
136.3
1889
Female, age 72, unknown
134.5
1941
Male, age 53, unknown
123.4
2699
Male, age 18, unknown
119.1
2590
Female, age 75, unknown
118.3
2665
Male, age 74, both hemispheres
111.5
2583
Male, age 75, right hemisphere
103.9
Superior colliculus nTPM: 122.2
1913
Female, age 42, unknown
133.5
1995
Male, age 72, unknown
132.4
2587
Male, age 74, left hemisphere
132.2
2261
Male, age 18, unknown
131.0
1796
Male, age 53, unknown
123.8
1895
Male, age 76, right hemisphere
123.7
2087
Female, age 72, unknown
123.6
1839
Male, age 51, unknown
113.3
2668
Female, age 75, unknown
110.6
2664
Male, age 75, both hemispheres
98.3
Ventral tegmental area nTPM: 124.6
2410
Female, age 72, unknown
146.4
1915
Female, age 42, unknown
130.2
1942
Male, age 51, unknown
119.9
2223
Female, age 72, unknown
118.2
2021
Male, age 53, unknown
118.0
2218
Male, age 76, both hemispheres
114.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
212.2
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 212.2
Samples: 139
Max nTPM: 340.3
Min nTPM: 142.4
Std nTPM: 42.5
Median nTPM: 199.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
340.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
332.0
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
328.9
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
306.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
305.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
304.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
299.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
298.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
298.1
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
291.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
285.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
283.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
279.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
275.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
272.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
270.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
267.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
266.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
264.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
262.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
259.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
258.8
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
257.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
257.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
255.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
254.4
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
253.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
252.1
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
244.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
243.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
242.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
242.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
240.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
238.8
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
237.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
236.5
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
234.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
232.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
230.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
230.6
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
228.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
228.4
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
228.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
227.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
226.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
225.8
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
223.0
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
222.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
220.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
220.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
219.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
217.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
217.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
216.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
214.6
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
214.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
211.9
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
211.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
209.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
209.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
208.4
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
207.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
205.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
205.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
204.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
203.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
202.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
202.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
201.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
199.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
198.5
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
197.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
196.7
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
196.3
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
195.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
194.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
194.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
193.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
192.4
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
192.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
192.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
191.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
191.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
190.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
190.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
189.5
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
189.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
189.1
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
189.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
188.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
188.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
187.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
186.0
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
185.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
184.8
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
184.7
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
184.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
184.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
184.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
183.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
182.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
181.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
181.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
180.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
180.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
180.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
179.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
179.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
179.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
178.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
176.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
175.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
174.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
174.4
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
173.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
173.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
172.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
172.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
172.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
172.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
170.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
170.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
170.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
169.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
168.4
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
167.3
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
166.5
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
165.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
163.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
163.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
161.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
160.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
159.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
159.4
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
159.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
158.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
158.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
148.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
142.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
259.1
Mouse sample
Sample description
nTPM
Midbrain nTPM: 259.1
Samples: 4
Max nTPM: 265.8
Min nTPM: 255.6
Sample A
Male
265.8
Sample B
Male
255.6
Sample C
Female
257.9
Sample D
Female
257.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.