HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:54.7 nTPM
HPA Brain:38.0 nTPM
GTEx:54.7 nTPM
FANTOM5:14.6 Scaled Tags Per Million
Pig:10.5 nTPM
Mouse:19.5 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023384
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.0
Sample id Sample description nTPM
Hippocampus
nTPM: 35.2
2148 Female, age 91, left hemisphere 39.5
1898 Male, age 80, left hemisphere 36.2
2621 Female, age 67, right hemisphere 35.4
2529 Female, age 94, left hemisphere 33.8
1855 Male, age 76, left hemisphere 33.3
1911 Female, age 85, right hemisphere 32.9
Dentate gyrus
nTPM: 35.9
2531 Female, age 67, both hemispheres 44.3
2530 Female, age 94, left hemisphere 38.7
1927 Female, age 91, both hemispheres 38.1
2528 Male, age 74, both hemispheres 34.6
2010 Male, age 76, both hemispheres 31.2
2246 Female, age 85, both hemispheres 28.6
Entorhinal gyrus
nTPM: 37.4
2613 Female, age 94, left hemisphere 45.6
2764 Male, age 80, right hemisphere 40.7
1787 Male, age 76, left hemisphere 36.7
2117 Female, age 91, right hemisphere 35.5
2686 Male, age 75, right hemisphere 34.0
1938 Female, age 85, left hemisphere 31.9
Hippocampus, CA1
nTPM: 33.8
2749 Male, age 80, left hemisphere 39.5
1873 Female, age 85, both hemispheres 34.5
2527 Male, age 74, both hemispheres 32.3
2045 Male, age 76, both hemispheres 31.8
2082 Female, age 91, right hemisphere 30.9
Hippocampus, CA2
nTPM: 34.7
1940 Female, age 85, left hemisphere 38.7
1892 Male, age 76, both hemispheres 36.2
1963 Male, age 80, left hemisphere 36.2
2437 Female, age 94, left hemisphere 34.6
2113 Female, age 91, right hemisphere 31.6
2249 Male, age 74, both hemispheres 31.0
Hippocampus, CA3
nTPM: 38.0
2861 Female, age 67, both hemispheres 47.3
2620 Female, age 94, left hemisphere 45.2
2436 Male, age 74, both hemispheres 35.5
1867 Male, age 76, both hemispheres 35.0
2137 Male, age 80, left hemisphere 33.8
1891 Female, age 85, both hemispheres 31.4
Parahippocampal cortex
nTPM: 34.1
2622 Female, age 67, right hemisphere 42.2
2250 Female, age 67, right hemisphere 35.0
1990 Female, age 91, right hemisphere 34.8
2532 Female, age 72, left hemisphere 34.3
2018 Male, age 76, both hemispheres 33.5
1933 Female, age 85, both hemispheres 33.1
2245 Female, age 91, both hemispheres 33.0
1850 Male, age 80, both hemispheres 32.9
2692 Male, age 74, both hemispheres 32.7
2693 Female, age 94, both hemispheres 29.8
Perirhinal gyrus
nTPM: 32.4
1847 Female, age 91, left hemisphere 35.1
2521 Female, age 94, right hemisphere 32.8
1794 Male, age 80, right hemisphere 32.7
1841 Female, age 85, right hemisphere 31.7
2848 Male, age 76, right hemisphere 29.7
Subiculum
nTPM: 33.1
2729 Female, age 91, right hemisphere 37.6
2619 Male, age 74, both hemispheres 34.8
2042 Male, age 76, both hemispheres 32.8
1977 Female, age 85, both hemispheres 32.4
1901 Male, age 80, both hemispheres 32.0
2438 Female, age 94, left hemisphere 28.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.7
Samples: 197

Max nTPM: 92.7
Min nTPM: 22.8
Std nTPM: 13.1
Median nTPM: 52.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 92.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 92.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 86.7
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 85.4
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 83.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 80.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 80.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 79.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 79.2
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 79.2
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 79.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.6
FF:10153-102I9 76 years, female 14.7
FF:10169-103B7 60 years, female 14.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.5
Pig sample Sample description nTPM
Subiculum
nTPM: 9.6
Samples: 4

Max nTPM: 12.6
Min nTPM: 8.4
Sample A Female 12.6
Sample B Female 8.5
Sample C Male 8.9
Sample D Male 8.4
Dorsal hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 12.3
Min nTPM: 8.8
Sample A Female 12.3
Sample B Female 11.0
Sample C Male 10.0
Sample D Male 8.8
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 10.4
Min nTPM: 8.5
Sample A Female 10.4
Sample B Female 8.5
Sample C Male 10.1
Sample D Male 8.5
Ventral hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 11.5
Min nTPM: 7.5
Sample A Female 10.8
Sample B Female 7.5
Sample C Male 11.5
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 21.7
Min nTPM: 15.8
Sample A Male 19.0
Sample B Male 21.5
Sample C Female 21.7
Sample D Female 15.8
Hippocampal formation
nTPM: 19.1
Samples: 4

Max nTPM: 21.6
Min nTPM: 16.6
Sample A Male 19.6
Sample B Male 18.4
Sample C Female 16.6
Sample D Female 21.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
68341884 Antisense, RP_041207_02_D04, Mouse strain C57BL/6J (56 days, male) 5.7

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