HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:35.2 nTPM
HPA Brain:179.8 nTPM
GTEx:35.2 nTPM
FANTOM5:205.9 Scaled Tags Per Million
Pig:40.7 nTPM
Mouse:206.7 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064454
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 179.8
Sample id Sample description nTPM
Hippocampus
nTPM: 179.8
2148 Female, age 91, left hemisphere 205.2
2529 Female, age 94, left hemisphere 188.4
1911 Female, age 85, right hemisphere 181.7
1898 Male, age 80, left hemisphere 174.7
1855 Male, age 76, left hemisphere 168.1
2621 Female, age 67, right hemisphere 160.5
Dentate gyrus
nTPM: 147.5
2528 Male, age 74, both hemispheres 212.2
2530 Female, age 94, left hemisphere 154.4
2246 Female, age 85, both hemispheres 146.4
1927 Female, age 91, both hemispheres 137.6
2010 Male, age 76, both hemispheres 123.7
2531 Female, age 67, both hemispheres 110.8
Entorhinal gyrus
nTPM: 152.3
2117 Female, age 91, right hemisphere 234.1
1938 Female, age 85, left hemisphere 158.8
2764 Male, age 80, right hemisphere 137.5
2686 Male, age 75, right hemisphere 134.8
1787 Male, age 76, left hemisphere 128.6
2613 Female, age 94, left hemisphere 120.0
Hippocampus, CA1
nTPM: 143.4
2527 Male, age 74, both hemispheres 195.6
1873 Female, age 85, both hemispheres 158.2
2082 Female, age 91, right hemisphere 146.0
2749 Male, age 80, left hemisphere 110.5
2045 Male, age 76, both hemispheres 106.7
Hippocampus, CA2
nTPM: 151.6
2249 Male, age 74, both hemispheres 177.6
2113 Female, age 91, right hemisphere 166.7
2437 Female, age 94, left hemisphere 161.0
1940 Female, age 85, left hemisphere 150.5
1963 Male, age 80, left hemisphere 149.1
1892 Male, age 76, both hemispheres 104.8
Hippocampus, CA3
nTPM: 140.8
2861 Female, age 67, both hemispheres 179.0
1891 Female, age 85, both hemispheres 160.1
2436 Male, age 74, both hemispheres 144.2
2620 Female, age 94, left hemisphere 135.4
1867 Male, age 76, both hemispheres 124.2
2137 Male, age 80, left hemisphere 101.6
Parahippocampal cortex
nTPM: 144.1
2692 Male, age 74, both hemispheres 186.9
2622 Female, age 67, right hemisphere 172.7
1933 Female, age 85, both hemispheres 157.1
2250 Female, age 67, right hemisphere 148.1
2245 Female, age 91, both hemispheres 143.9
1990 Female, age 91, right hemisphere 138.6
1850 Male, age 80, both hemispheres 127.8
2693 Female, age 94, both hemispheres 123.5
2018 Male, age 76, both hemispheres 121.5
2532 Female, age 72, left hemisphere 120.8
Perirhinal gyrus
nTPM: 114.5
1794 Male, age 80, right hemisphere 136.9
1847 Female, age 91, left hemisphere 125.1
1841 Female, age 85, right hemisphere 112.3
2521 Female, age 94, right hemisphere 106.8
2848 Male, age 76, right hemisphere 91.6
Subiculum
nTPM: 165.4
2619 Male, age 74, both hemispheres 212.2
2729 Female, age 91, right hemisphere 211.7
2042 Male, age 76, both hemispheres 154.1
1901 Male, age 80, both hemispheres 143.4
1977 Female, age 85, both hemispheres 138.3
2438 Female, age 94, left hemisphere 132.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.2
Samples: 197

Max nTPM: 93.7
Min nTPM: 6.3
Std nTPM: 14.3
Median nTPM: 33.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 93.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 82.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 76.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 71.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 69.8
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 67.8
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 66.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 65.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 61.6
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 59.6
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 59.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 205.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 205.9
FF:10153-102I9 76 years, female 252.9
FF:10169-103B7 60 years, female 158.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.7
Pig sample Sample description nTPM
Subiculum
nTPM: 39.1
Samples: 4

Max nTPM: 48.5
Min nTPM: 30.5
Sample A Female 48.5
Sample B Female 38.6
Sample C Male 38.8
Sample D Male 30.5
Dorsal hippocampus
nTPM: 34.5
Samples: 4

Max nTPM: 45.5
Min nTPM: 21.5
Sample A Female 45.5
Sample B Female 27.8
Sample C Male 43.1
Sample D Male 21.5
Entorhinal cortex
nTPM: 34.1
Samples: 4

Max nTPM: 36.4
Min nTPM: 29.6
Sample A Female 35.7
Sample B Female 34.5
Sample C Male 36.4
Sample D Male 29.6
Ventral hippocampus
nTPM: 40.7
Samples: 4

Max nTPM: 56.3
Min nTPM: 31.1
Sample A Female 41.0
Sample B Female 31.1
Sample C Male 56.3
Sample D Male 34.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 206.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 206.7
Samples: 4

Max nTPM: 228.0
Min nTPM: 184.3
Sample A Male 228.0
Sample B Male 184.3
Sample C Female 217.5
Sample D Female 196.9
Hippocampal formation
nTPM: 201.2
Samples: 4

Max nTPM: 211.7
Min nTPM: 187.0
Sample A Male 209.2
Sample B Male 187.0
Sample C Female 196.9
Sample D Female 211.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
69257546 Antisense, RP_050331_02_G11, Mouse strain C57BL/6J (56 days, male) 7.7
74724670 Antisense, RP_060220_04_A11, Mouse strain C57BL/6J (56 days, male) 5.9

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