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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
191.7
nTPM
FANTOM5:
199.3
Scaled Tags Per Million
Pig:
62.6
nTPM
Allen mouse:
5.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
191.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 133.7
1984
Male, age 76, both hemispheres
146.5
2090
Male, age 80, both hemispheres
146.4
2301
Female, age 85, both hemispheres
130.1
2188
Female, age 91, both hemispheres
111.6
Dorsal cochlear nucleus nTPM: 188.0
2370
Male, age 61, both hemispheres
232.4
2802
Male, age 74, right hemisphere
205.3
2378
Male, age 80, both hemispheres
190.2
2058
Male, age 76, both hemispheres
177.1
2187
Female, age 91, both hemispheres
135.3
Dorsal tegmental nucleus nTPM: 142.5
1936
Male, age 76, left hemisphere
187.7
2083
Male, age 80, both hemispheres
178.1
2326
Male, age 74, both hemispheres
147.4
2358
Male, age 61, both hemispheres
56.7
Dorsolateral tegmental area nTPM: 150.6
2360
Male, age 74, both hemispheres
179.5
2751
Female, age 85, both hemispheres
172.6
2654
Male, age 80, both hemispheres
171.2
2141
Male, age 76, both hemispheres
170.1
2337
Male, age 61, both hemispheres
59.8
Kolliker-Fuse nucleus nTPM: 153.0
2315
Male, age 76, right hemisphere
192.3
2163
Male, age 80, both hemispheres
155.4
2793
Female, age 91, left hemisphere
111.3
Lateral lemniscal nuclei nTPM: 114.2
2169
Male, age 76, both hemispheres
141.7
2746
Female, age 85, left hemisphere
118.0
2036
Male, age 80, both hemispheres
111.1
2320
Female, age 91, left hemisphere
102.7
2453
Male, age 74, right hemisphere
97.6
Lateral parabrachial nucleus nTPM: 130.4
2792
Male, age 76, both hemispheres
166.8
2139
Female, age 85, right hemisphere
157.6
2013
Male, age 80, both hemispheres
136.0
2790
Male, age 61, both hemispheres
61.0
Lateral vestibular nucleus nTPM: 191.7
2184
Male, age 76, both hemispheres
196.1
2311
Male, age 80, both hemispheres
187.4
Locus coeruleus nTPM: 140.0
2317
Female, age 72, unknown
177.6
2123
Female, age 91, both hemispheres
151.0
1980
Male, age 76, both hemispheres
147.3
2014
Male, age 55, unknown
140.5
2162
Male, age 80, both hemispheres
138.8
2788
Male, age 74, unknown
122.8
2720
Male, age 74, both hemispheres
102.1
Medial parabrachial nucleus nTPM: 141.1
2463
Female, age 85, right hemisphere
179.8
2786
Male, age 76, both hemispheres
164.1
2170
Female, age 91, both hemispheres
149.1
2854
Male, age 80, both hemispheres
119.5
2156
Male, age 61, both hemispheres
93.3
Medial periolivary nuclei nTPM: 118.4
2063
Male, age 76, both hemispheres
148.6
2791
Male, age 74, right hemisphere
127.4
2171
Female, age 85, both hemispheres
108.3
2081
Male, age 80, both hemispheres
103.9
2458
Female, age 91, both hemispheres
103.8
Motor facial nucleus nTPM: 130.4
2795
Female, age 91, both hemispheres
168.4
2062
Male, age 76, both hemispheres
164.6
2126
Male, age 61, both hemispheres
159.9
2365
Male, age 74, right hemisphere
111.5
2697
Female, age 85, both hemispheres
96.9
2327
Male, age 80, both hemispheres
80.8
Motor trigeminal nucleus nTPM: 125.0
2309
Male, age 76, both hemispheres
167.8
2335
Male, age 61, both hemispheres
143.6
2560
Male, age 74, both hemispheres
109.5
2079
Male, age 80, both hemispheres
106.4
2321
Female, age 91, both hemispheres
97.5
Nuclei of the trapezoid body nTPM: 126.5
1983
Male, age 76, both hemispheres
155.9
2368
Female, age 91, both hemispheres
134.1
2159
Male, age 61, both hemispheres
122.9
2735
Female, age 85, both hemispheres
110.6
2166
Male, age 80, both hemispheres
109.1
Nucleus raphe magnus nTPM: 107.0
2051
Male, age 76, both hemispheres
140.4
2455
Male, age 74, both hemispheres
115.9
2328
Male, age 80, both hemispheres
115.1
2160
Male, age 61, both hemispheres
114.0
2459
Female, age 91, both hemispheres
91.9
2172
Female, age 85, both hemispheres
64.8
Paramedian reticular nucleus nTPM: 131.5
2057
Male, age 80, both hemispheres
156.2
2313
Male, age 61, both hemispheres
143.8
2052
Male, age 76, both hemispheres
114.0
2050
Female, age 85, both hemispheres
111.9
Pedunculopontine tegmental nucleus nTPM: 134.4
1921
Female, age 85, both hemispheres
177.5
2334
Male, age 80, both hemispheres
146.2
2338
Male, age 61, both hemispheres
79.4
Pontine nuclei nTPM: 111.3
1968
Male, age 76, left hemisphere
146.1
1863
Male, age 55, unknown
140.2
2115
Male, age 80, left hemisphere
113.5
2319
Female, age 91, both hemispheres
111.2
2787
Female, age 85, both hemispheres
103.3
2109
Female, age 72, unknown
97.7
2454
Male, age 74, left hemisphere
90.9
2727
Male, age 61, right hemisphere
87.3
Pontine raphe nucleus nTPM: 144.2
2853
Male, age 76, midline
175.5
2122
Female, age 85, midline
113.0
Posteroventral cochlear nucleus nTPM: 162.7
2371
Male, age 61, both hemispheres
263.7
2752
Female, age 85, both hemispheres
147.9
2070
Male, age 76, both hemispheres
143.3
2341
Male, age 80, both hemispheres
141.9
2135
Female, age 91, both hemispheres
116.6
Principal sensory trigeminal nucleus nTPM: 131.6
2324
Male, age 76, both hemispheres
209.8
2158
Male, age 61, both hemispheres
127.6
2008
Male, age 80, left hemisphere
95.1
2367
Female, age 91, left hemisphere
94.0
Reticular pontine nucleus, caudal nTPM: 117.4
2092
Male, age 76, both hemispheres
163.5
2457
Female, age 91, both hemispheres
112.6
2559
Male, age 74, both hemispheres
99.6
2332
Male, age 80, right hemisphere
93.9
Reticular pontine nucleus, oral nTPM: 140.5
2167
Male, age 76, both hemispheres
187.7
1939
Male, age 80, both hemispheres
168.2
2012
Female, age 85, both hemispheres
137.8
2366
Female, age 91, both hemispheres
113.4
2361
Male, age 74, both hemispheres
95.2
Reticulotegmental nucleus nTPM: 153.9
2333
Male, age 80, both hemispheres
173.0
2322
Female, age 91, both hemispheres
161.8
2325
Male, age 76, both hemispheres
159.8
2452
Male, age 74, both hemispheres
121.0
Spinal trigeminal nucleus, oral nTPM: 142.0
1978
Male, age 76, both hemispheres
157.1
2737
Female, age 85, both hemispheres
140.1
2164
Male, age 80, both hemispheres
128.8
Subcoeruleus area nTPM: 146.2
2369
Female, age 85, left hemisphere
184.3
2451
Male, age 74, both hemispheres
138.7
2089
Male, age 76, left hemisphere
138.5
2323
Female, age 91, left hemisphere
137.3
1958
Male, age 80, both hemispheres
132.2
Superior olive nTPM: 114.7
2020
Male, age 76, both hemispheres
137.9
2364
Male, age 74, right hemisphere
123.4
2561
Female, age 91, both hemispheres
110.6
2329
Male, age 80, right hemisphere
103.8
1875
Female, age 85, both hemispheres
97.7
Ventral periolivary nuclei nTPM: 113.4
2023
Male, age 76, both hemispheres
126.6
2165
Male, age 80, both hemispheres
123.5
2130
Female, age 85, both hemispheres
120.7
2794
Female, age 91, left hemisphere
82.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 123.3
1959
Male, age 76, both hemispheres
144.0
2359
Male, age 61, both hemispheres
134.4
2456
Female, age 91, both hemispheres
133.7
2840
Female, age 85, both hemispheres
123.9
2161
Male, age 80, both hemispheres
103.8
2449
Male, age 74, both hemispheres
99.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
62.6
Pig sample
Sample description
nTPM
Pons nTPM: 62.7
Samples: 4
Max nTPM: 73.7
Min nTPM: 53.9
Sample A
Female
61.6
Sample B
Female
53.9
Sample C
Male
61.4
Sample D
Male
73.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
