HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:43.6 nTPM
HPA Brain:56.2 nTPM
GTEx:43.6 nTPM
FANTOM5:127.1 Scaled Tags Per Million
Pig:117.2 nTPM
Mouse:76.7 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047139Antibody HPA050539Antibody CAB034442Antibody CAB037251
Glial cells Not detectedNot detectedLowMedium
Neuronal cells HighHighHighHigh









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.2
Sample id Sample description nTPM
Hippocampus
nTPM: 56.2
1898 Male, age 80, left hemisphere 66.5
1855 Male, age 76, left hemisphere 63.4
1911 Female, age 85, right hemisphere 57.2
2148 Female, age 91, left hemisphere 51.5
2529 Female, age 94, left hemisphere 51.1
2621 Female, age 67, right hemisphere 47.6
Dentate gyrus
nTPM: 55.6
2010 Male, age 76, both hemispheres 67.9
2528 Male, age 74, both hemispheres 58.5
2246 Female, age 85, both hemispheres 55.3
2530 Female, age 94, left hemisphere 54.8
1927 Female, age 91, both hemispheres 54.4
2531 Female, age 67, both hemispheres 42.4
Entorhinal gyrus
nTPM: 50.5
2117 Female, age 91, right hemisphere 66.9
1938 Female, age 85, left hemisphere 59.0
1787 Male, age 76, left hemisphere 49.6
2764 Male, age 80, right hemisphere 43.7
2613 Female, age 94, left hemisphere 42.2
2686 Male, age 75, right hemisphere 41.3
Hippocampus, CA1
nTPM: 55.5
2045 Male, age 76, both hemispheres 62.7
1873 Female, age 85, both hemispheres 60.1
2527 Male, age 74, both hemispheres 52.3
2749 Male, age 80, left hemisphere 51.6
2082 Female, age 91, right hemisphere 50.7
Hippocampus, CA2
nTPM: 53.8
2249 Male, age 74, both hemispheres 61.4
1963 Male, age 80, left hemisphere 55.3
1940 Female, age 85, left hemisphere 54.0
2113 Female, age 91, right hemisphere 53.2
1892 Male, age 76, both hemispheres 52.2
2437 Female, age 94, left hemisphere 46.5
Hippocampus, CA3
nTPM: 53.0
1891 Female, age 85, both hemispheres 64.2
2436 Male, age 74, both hemispheres 55.2
1867 Male, age 76, both hemispheres 53.7
2137 Male, age 80, left hemisphere 52.3
2620 Female, age 94, left hemisphere 48.9
2861 Female, age 67, both hemispheres 44.0
Parahippocampal cortex
nTPM: 50.5
2250 Female, age 67, right hemisphere 58.5
1850 Male, age 80, both hemispheres 54.6
1933 Female, age 85, both hemispheres 53.1
2693 Female, age 94, both hemispheres 52.8
1990 Female, age 91, right hemisphere 52.1
2692 Male, age 74, both hemispheres 51.8
2018 Male, age 76, both hemispheres 49.8
2245 Female, age 91, both hemispheres 48.4
2532 Female, age 72, left hemisphere 47.3
2622 Female, age 67, right hemisphere 36.9
Perirhinal gyrus
nTPM: 51.0
1841 Female, age 85, right hemisphere 56.6
2521 Female, age 94, right hemisphere 51.5
2848 Male, age 76, right hemisphere 50.0
1847 Female, age 91, left hemisphere 49.8
1794 Male, age 80, right hemisphere 47.2
Subiculum
nTPM: 56.2
2729 Female, age 91, right hemisphere 64.1
2042 Male, age 76, both hemispheres 63.4
1901 Male, age 80, both hemispheres 58.0
1977 Female, age 85, both hemispheres 55.3
2619 Male, age 74, both hemispheres 52.7
2438 Female, age 94, left hemisphere 43.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.6
Samples: 197

Max nTPM: 91.1
Min nTPM: 24.8
Std nTPM: 10.3
Median nTPM: 42.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 91.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 87.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 73.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 67.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 66.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 66.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 65.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 64.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 63.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 63.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 62.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 127.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 127.1
FF:10169-103B7 60 years, female 130.8
FF:10153-102I9 76 years, female 123.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 117.2
Pig sample Sample description nTPM
Subiculum
nTPM: 95.7
Samples: 4

Max nTPM: 109.3
Min nTPM: 86.4
Sample A Female 109.3
Sample B Female 93.9
Sample C Male 86.4
Sample D Male 93.0
Dorsal hippocampus
nTPM: 117.2
Samples: 4

Max nTPM: 139.8
Min nTPM: 77.2
Sample A Female 138.6
Sample B Female 113.2
Sample C Male 139.8
Sample D Male 77.2
Entorhinal cortex
nTPM: 86.2
Samples: 4

Max nTPM: 96.7
Min nTPM: 73.9
Sample A Female 80.6
Sample B Female 96.7
Sample C Male 93.5
Sample D Male 73.9
Ventral hippocampus
nTPM: 96.9
Samples: 4

Max nTPM: 103.2
Min nTPM: 82.1
Sample A Female 103.2
Sample B Female 82.1
Sample C Male 100.4
Sample D Male 101.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 76.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 67.1
Samples: 4

Max nTPM: 69.3
Min nTPM: 63.6
Sample A Male 67.0
Sample B Male 63.6
Sample C Female 68.6
Sample D Female 69.3
Hippocampal formation
nTPM: 76.7
Samples: 4

Max nTPM: 88.1
Min nTPM: 66.6
Sample A Male 66.6
Sample B Male 72.6
Sample C Female 79.3
Sample D Female 88.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
68910987 Antisense, RP_050203_01_G02, Mouse strain C57BL/6J (56 days, male) 8.1

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