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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
214.5
nTPM
FANTOM5:
445.9
Scaled Tags Per Million
Allen mouse:
11.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
214.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 132.7
1984
Male, age 76, both hemispheres
142.6
2301
Female, age 85, both hemispheres
135.9
2188
Female, age 91, both hemispheres
128.2
2090
Male, age 80, both hemispheres
124.1
Dorsal cochlear nucleus nTPM: 140.1
2187
Female, age 91, both hemispheres
152.7
2058
Male, age 76, both hemispheres
147.8
2802
Male, age 74, right hemisphere
144.5
2370
Male, age 61, both hemispheres
134.6
2378
Male, age 80, both hemispheres
121.1
Dorsal tegmental nucleus nTPM: 148.7
2083
Male, age 80, both hemispheres
163.2
1936
Male, age 76, left hemisphere
158.3
2326
Male, age 74, both hemispheres
148.9
2358
Male, age 61, both hemispheres
124.2
Dorsolateral tegmental area nTPM: 159.5
2751
Female, age 85, both hemispheres
188.9
2654
Male, age 80, both hemispheres
169.4
2360
Male, age 74, both hemispheres
165.7
2141
Male, age 76, both hemispheres
160.3
2337
Male, age 61, both hemispheres
113.5
Kolliker-Fuse nucleus nTPM: 152.7
2315
Male, age 76, right hemisphere
168.8
2163
Male, age 80, both hemispheres
167.7
2793
Female, age 91, left hemisphere
121.6
Lateral lemniscal nuclei nTPM: 170.2
2036
Male, age 80, both hemispheres
210.1
2169
Male, age 76, both hemispheres
200.7
2746
Female, age 85, left hemisphere
181.0
2453
Male, age 74, right hemisphere
144.1
2320
Female, age 91, left hemisphere
114.9
Lateral parabrachial nucleus nTPM: 161.9
2139
Female, age 85, right hemisphere
198.1
2013
Male, age 80, both hemispheres
166.9
2790
Male, age 61, both hemispheres
143.3
2792
Male, age 76, both hemispheres
139.5
Lateral vestibular nucleus nTPM: 146.3
2184
Male, age 76, both hemispheres
153.9
2311
Male, age 80, both hemispheres
138.8
Locus coeruleus nTPM: 210.1
2014
Male, age 55, unknown
252.8
2788
Male, age 74, unknown
231.8
2123
Female, age 91, both hemispheres
225.2
2317
Female, age 72, unknown
206.1
2720
Male, age 74, both hemispheres
186.3
2162
Male, age 80, both hemispheres
185.0
1980
Male, age 76, both hemispheres
183.2
Medial parabrachial nucleus nTPM: 157.1
2170
Female, age 91, both hemispheres
178.6
2854
Male, age 80, both hemispheres
170.7
2463
Female, age 85, right hemisphere
151.5
2786
Male, age 76, both hemispheres
144.4
2156
Male, age 61, both hemispheres
140.4
Medial periolivary nuclei nTPM: 177.4
2063
Male, age 76, both hemispheres
238.3
2171
Female, age 85, both hemispheres
233.3
2791
Male, age 74, right hemisphere
182.1
2081
Male, age 80, both hemispheres
131.6
2458
Female, age 91, both hemispheres
101.5
Motor facial nucleus nTPM: 169.8
2062
Male, age 76, both hemispheres
251.6
2365
Male, age 74, right hemisphere
163.6
2126
Male, age 61, both hemispheres
159.0
2795
Female, age 91, both hemispheres
154.7
2327
Male, age 80, both hemispheres
145.7
2697
Female, age 85, both hemispheres
144.5
Motor trigeminal nucleus nTPM: 136.5
2079
Male, age 80, both hemispheres
160.7
2309
Male, age 76, both hemispheres
151.9
2335
Male, age 61, both hemispheres
136.3
2560
Male, age 74, both hemispheres
125.1
2321
Female, age 91, both hemispheres
108.6
Nuclei of the trapezoid body nTPM: 208.1
2159
Male, age 61, both hemispheres
285.4
1983
Male, age 76, both hemispheres
238.1
2735
Female, age 85, both hemispheres
235.1
2166
Male, age 80, both hemispheres
147.8
2368
Female, age 91, both hemispheres
133.9
Nucleus raphe magnus nTPM: 196.5
2160
Male, age 61, both hemispheres
306.5
2172
Female, age 85, both hemispheres
213.5
2455
Male, age 74, both hemispheres
194.5
2051
Male, age 76, both hemispheres
180.7
2328
Male, age 80, both hemispheres
153.8
2459
Female, age 91, both hemispheres
129.9
Paramedian reticular nucleus nTPM: 202.7
2313
Male, age 61, both hemispheres
231.8
2050
Female, age 85, both hemispheres
223.3
2057
Male, age 80, both hemispheres
183.6
2052
Male, age 76, both hemispheres
172.1
Pedunculopontine tegmental nucleus nTPM: 177.7
1921
Female, age 85, both hemispheres
200.3
2334
Male, age 80, both hemispheres
178.9
2338
Male, age 61, both hemispheres
153.9
Pontine nuclei nTPM: 201.7
2727
Male, age 61, right hemisphere
310.4
1863
Male, age 55, unknown
271.5
2109
Female, age 72, unknown
218.1
2787
Female, age 85, both hemispheres
204.4
1968
Male, age 76, left hemisphere
202.4
2454
Male, age 74, left hemisphere
156.4
2319
Female, age 91, both hemispheres
128.6
2115
Male, age 80, left hemisphere
122.0
Pontine raphe nucleus nTPM: 214.5
2122
Female, age 85, midline
228.0
2853
Male, age 76, midline
200.9
Posteroventral cochlear nucleus nTPM: 139.8
2752
Female, age 85, both hemispheres
199.5
2070
Male, age 76, both hemispheres
146.1
2371
Male, age 61, both hemispheres
130.5
2341
Male, age 80, both hemispheres
119.2
2135
Female, age 91, both hemispheres
103.6
Principal sensory trigeminal nucleus nTPM: 177.6
2158
Male, age 61, both hemispheres
251.7
2008
Male, age 80, left hemisphere
193.8
2324
Male, age 76, both hemispheres
151.3
2367
Female, age 91, left hemisphere
113.6
Reticular pontine nucleus, caudal nTPM: 141.5
2092
Male, age 76, both hemispheres
179.4
2332
Male, age 80, right hemisphere
142.1
2559
Male, age 74, both hemispheres
133.0
2457
Female, age 91, both hemispheres
111.5
Reticular pontine nucleus, oral nTPM: 163.5
2012
Female, age 85, both hemispheres
211.1
1939
Male, age 80, both hemispheres
190.9
2167
Male, age 76, both hemispheres
170.3
2361
Male, age 74, both hemispheres
135.9
2366
Female, age 91, both hemispheres
109.0
Reticulotegmental nucleus nTPM: 156.1
2325
Male, age 76, both hemispheres
195.5
2333
Male, age 80, both hemispheres
149.0
2322
Female, age 91, both hemispheres
141.0
2452
Male, age 74, both hemispheres
138.9
Spinal trigeminal nucleus, oral nTPM: 151.6
2737
Female, age 85, both hemispheres
178.9
1978
Male, age 76, both hemispheres
143.5
2164
Male, age 80, both hemispheres
132.3
Subcoeruleus area nTPM: 165.1
1958
Male, age 80, both hemispheres
191.4
2323
Female, age 91, left hemisphere
177.3
2369
Female, age 85, left hemisphere
163.4
2089
Male, age 76, left hemisphere
161.2
2451
Male, age 74, both hemispheres
132.3
Superior olive nTPM: 166.9
1875
Female, age 85, both hemispheres
223.7
2364
Male, age 74, right hemisphere
180.3
2020
Male, age 76, both hemispheres
178.1
2329
Male, age 80, right hemisphere
141.4
2561
Female, age 91, both hemispheres
110.9
Ventral periolivary nuclei nTPM: 176.8
2130
Female, age 85, both hemispheres
216.0
2165
Male, age 80, both hemispheres
191.9
2023
Male, age 76, both hemispheres
178.7
2794
Female, age 91, left hemisphere
120.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 156.3
1959
Male, age 76, both hemispheres
179.2
2840
Female, age 85, both hemispheres
177.0
2359
Male, age 61, both hemispheres
164.4
2449
Male, age 74, both hemispheres
157.2
2161
Male, age 80, both hemispheres
150.5
2456
Female, age 91, both hemispheres
109.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
