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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
168.5
nTPM
FANTOM5:
541.5
Scaled Tags Per Million
Pig:
248.7
nTPM
Allen mouse:
8.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
168.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 87.4
2188
Female, age 91, both hemispheres
97.2
1984
Male, age 76, both hemispheres
95.0
2301
Female, age 85, both hemispheres
88.8
2090
Male, age 80, both hemispheres
68.3
Dorsal cochlear nucleus nTPM: 77.7
2058
Male, age 76, both hemispheres
87.4
2187
Female, age 91, both hemispheres
84.9
2802
Male, age 74, right hemisphere
80.6
2370
Male, age 61, both hemispheres
68.1
2378
Male, age 80, both hemispheres
67.4
Dorsal tegmental nucleus nTPM: 88.8
2083
Male, age 80, both hemispheres
108.6
2326
Male, age 74, both hemispheres
88.1
1936
Male, age 76, left hemisphere
80.2
2358
Male, age 61, both hemispheres
78.5
Dorsolateral tegmental area nTPM: 84.9
2751
Female, age 85, both hemispheres
116.7
2654
Male, age 80, both hemispheres
105.9
2141
Male, age 76, both hemispheres
83.8
2360
Male, age 74, both hemispheres
71.7
2337
Male, age 61, both hemispheres
46.6
Kolliker-Fuse nucleus nTPM: 93.0
2793
Female, age 91, left hemisphere
112.8
2163
Male, age 80, both hemispheres
110.3
2315
Male, age 76, right hemisphere
56.1
Lateral lemniscal nuclei nTPM: 151.6
2169
Male, age 76, both hemispheres
183.1
2036
Male, age 80, both hemispheres
171.4
2453
Male, age 74, right hemisphere
163.7
2746
Female, age 85, left hemisphere
128.9
2320
Female, age 91, left hemisphere
110.9
Lateral parabrachial nucleus nTPM: 97.2
2139
Female, age 85, right hemisphere
154.5
2790
Male, age 61, both hemispheres
90.1
2013
Male, age 80, both hemispheres
89.0
2792
Male, age 76, both hemispheres
55.1
Lateral vestibular nucleus nTPM: 85.2
2184
Male, age 76, both hemispheres
97.7
2311
Male, age 80, both hemispheres
72.7
Locus coeruleus nTPM: 96.2
2123
Female, age 91, both hemispheres
138.2
2720
Male, age 74, both hemispheres
116.0
2162
Male, age 80, both hemispheres
103.9
2788
Male, age 74, unknown
85.0
2014
Male, age 55, unknown
84.7
2317
Female, age 72, unknown
73.9
1980
Male, age 76, both hemispheres
72.0
Medial parabrachial nucleus nTPM: 99.8
2854
Male, age 80, both hemispheres
133.0
2170
Female, age 91, both hemispheres
97.7
2786
Male, age 76, both hemispheres
92.9
2156
Male, age 61, both hemispheres
92.4
2463
Female, age 85, right hemisphere
82.7
Medial periolivary nuclei nTPM: 137.0
2171
Female, age 85, both hemispheres
208.8
2063
Male, age 76, both hemispheres
185.4
2791
Male, age 74, right hemisphere
131.6
2458
Female, age 91, both hemispheres
87.0
2081
Male, age 80, both hemispheres
72.2
Motor facial nucleus nTPM: 135.1
2062
Male, age 76, both hemispheres
187.4
2365
Male, age 74, right hemisphere
168.5
2697
Female, age 85, both hemispheres
137.6
2327
Male, age 80, both hemispheres
117.4
2126
Male, age 61, both hemispheres
104.8
2795
Female, age 91, both hemispheres
94.6
Motor trigeminal nucleus nTPM: 103.5
2560
Male, age 74, both hemispheres
125.9
2079
Male, age 80, both hemispheres
122.1
2309
Male, age 76, both hemispheres
91.9
2321
Female, age 91, both hemispheres
89.3
2335
Male, age 61, both hemispheres
88.5
Nuclei of the trapezoid body nTPM: 163.3
2159
Male, age 61, both hemispheres
247.0
2735
Female, age 85, both hemispheres
194.7
1983
Male, age 76, both hemispheres
168.2
2166
Male, age 80, both hemispheres
113.1
2368
Female, age 91, both hemispheres
93.7
Nucleus raphe magnus nTPM: 168.5
2160
Male, age 61, both hemispheres
246.9
2172
Female, age 85, both hemispheres
206.3
2455
Male, age 74, both hemispheres
195.0
2051
Male, age 76, both hemispheres
132.2
2328
Male, age 80, both hemispheres
123.7
2459
Female, age 91, both hemispheres
106.9
Paramedian reticular nucleus nTPM: 150.4
2050
Female, age 85, both hemispheres
193.8
2313
Male, age 61, both hemispheres
165.8
2057
Male, age 80, both hemispheres
147.3
2052
Male, age 76, both hemispheres
94.6
Pedunculopontine tegmental nucleus nTPM: 98.7
1921
Female, age 85, both hemispheres
122.4
2334
Male, age 80, both hemispheres
86.8
2338
Male, age 61, both hemispheres
86.8
Pontine nuclei nTPM: 166.9
2727
Male, age 61, right hemisphere
230.1
1863
Male, age 55, unknown
206.5
2787
Female, age 85, both hemispheres
200.8
2454
Male, age 74, left hemisphere
180.0
2109
Female, age 72, unknown
175.2
1968
Male, age 76, left hemisphere
154.9
2319
Female, age 91, both hemispheres
101.4
2115
Male, age 80, left hemisphere
85.9
Pontine raphe nucleus nTPM: 144.7
2122
Female, age 85, midline
179.0
2853
Male, age 76, midline
110.4
Posteroventral cochlear nucleus nTPM: 80.0
2752
Female, age 85, both hemispheres
116.4
2070
Male, age 76, both hemispheres
88.1
2341
Male, age 80, both hemispheres
67.5
2371
Male, age 61, both hemispheres
66.8
2135
Female, age 91, both hemispheres
61.2
Principal sensory trigeminal nucleus nTPM: 135.2
2158
Male, age 61, both hemispheres
209.3
2008
Male, age 80, left hemisphere
148.1
2367
Female, age 91, left hemisphere
101.0
2324
Male, age 76, both hemispheres
82.2
Reticular pontine nucleus, caudal nTPM: 115.7
2332
Male, age 80, right hemisphere
130.0
2092
Male, age 76, both hemispheres
127.2
2559
Male, age 74, both hemispheres
112.0
2457
Female, age 91, both hemispheres
93.8
Reticular pontine nucleus, oral nTPM: 130.7
2012
Female, age 85, both hemispheres
170.5
2361
Male, age 74, both hemispheres
163.4
1939
Male, age 80, both hemispheres
121.7
2366
Female, age 91, both hemispheres
99.9
2167
Male, age 76, both hemispheres
98.1
Reticulotegmental nucleus nTPM: 109.3
2325
Male, age 76, both hemispheres
139.4
2452
Male, age 74, both hemispheres
115.4
2333
Male, age 80, both hemispheres
93.2
2322
Female, age 91, both hemispheres
89.2
Spinal trigeminal nucleus, oral nTPM: 98.2
2737
Female, age 85, both hemispheres
119.3
2164
Male, age 80, both hemispheres
99.1
1978
Male, age 76, both hemispheres
76.0
Subcoeruleus area nTPM: 106.3
1958
Male, age 80, both hemispheres
125.4
2089
Male, age 76, left hemisphere
114.7
2323
Female, age 91, left hemisphere
109.5
2369
Female, age 85, left hemisphere
104.5
2451
Male, age 74, both hemispheres
77.5
Superior olive nTPM: 136.4
1875
Female, age 85, both hemispheres
193.6
2364
Male, age 74, right hemisphere
159.7
2020
Male, age 76, both hemispheres
119.6
2329
Male, age 80, right hemisphere
110.2
2561
Female, age 91, both hemispheres
98.8
Ventral periolivary nuclei nTPM: 136.8
2130
Female, age 85, both hemispheres
177.0
2165
Male, age 80, both hemispheres
147.4
2023
Male, age 76, both hemispheres
116.9
2794
Female, age 91, left hemisphere
105.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 122.5
2449
Male, age 74, both hemispheres
172.8
2840
Female, age 85, both hemispheres
140.8
1959
Male, age 76, both hemispheres
127.2
2359
Male, age 61, both hemispheres
109.8
2161
Male, age 80, both hemispheres
103.7
2456
Female, age 91, both hemispheres
80.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
248.7
Pig sample
Sample description
nTPM
Pons nTPM: 248.8
Samples: 4
Max nTPM: 315.2
Min nTPM: 197.3
Sample A
Female
264.3
Sample B
Female
197.3
Sample C
Male
218.2
Sample D
Male
315.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
