HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:157.4 nTPM
HPA Brain:153.1 nTPM
GTEx:157.4 nTPM
FANTOM5:70.5 Scaled Tags Per Million
Pig:113.8 nTPM
Mouse:359.8 nTPM
Allen mouse:12.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040736Antibody CAB010032
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 153.1
Sample id Sample description nTPM
Hippocampus
nTPM: 148.7
1898 Male, age 80, left hemisphere 177.1
2529 Female, age 94, left hemisphere 152.4
1855 Male, age 76, left hemisphere 144.6
2621 Female, age 67, right hemisphere 144.5
1911 Female, age 85, right hemisphere 142.7
2148 Female, age 91, left hemisphere 130.9
Dentate gyrus
nTPM: 144.9
2530 Female, age 94, left hemisphere 170.1
2528 Male, age 74, both hemispheres 152.9
2010 Male, age 76, both hemispheres 147.4
1927 Female, age 91, both hemispheres 143.4
2246 Female, age 85, both hemispheres 129.9
2531 Female, age 67, both hemispheres 125.8
Entorhinal gyrus
nTPM: 141.4
2764 Male, age 80, right hemisphere 152.5
2613 Female, age 94, left hemisphere 149.8
1938 Female, age 85, left hemisphere 146.1
1787 Male, age 76, left hemisphere 144.4
2117 Female, age 91, right hemisphere 135.2
2686 Male, age 75, right hemisphere 120.1
Hippocampus, CA1
nTPM: 153.1
2749 Male, age 80, left hemisphere 201.2
1873 Female, age 85, both hemispheres 162.9
2527 Male, age 74, both hemispheres 134.8
2082 Female, age 91, right hemisphere 134.6
2045 Male, age 76, both hemispheres 132.2
Hippocampus, CA2
nTPM: 145.1
1963 Male, age 80, left hemisphere 177.6
2249 Male, age 74, both hemispheres 150.7
2437 Female, age 94, left hemisphere 145.5
1892 Male, age 76, both hemispheres 141.0
1940 Female, age 85, left hemisphere 130.5
2113 Female, age 91, right hemisphere 125.1
Hippocampus, CA3
nTPM: 143.9
2137 Male, age 80, left hemisphere 154.6
2861 Female, age 67, both hemispheres 153.4
2620 Female, age 94, left hemisphere 152.2
2436 Male, age 74, both hemispheres 139.9
1867 Male, age 76, both hemispheres 135.7
1891 Female, age 85, both hemispheres 127.7
Parahippocampal cortex
nTPM: 125.1
1933 Female, age 85, both hemispheres 150.6
2250 Female, age 67, right hemisphere 142.8
1850 Male, age 80, both hemispheres 133.2
2245 Female, age 91, both hemispheres 124.3
1990 Female, age 91, right hemisphere 123.7
2018 Male, age 76, both hemispheres 122.7
2622 Female, age 67, right hemisphere 121.0
2532 Female, age 72, left hemisphere 119.7
2692 Male, age 74, both hemispheres 109.0
2693 Female, age 94, both hemispheres 104.5
Perirhinal gyrus
nTPM: 137.0
1847 Female, age 91, left hemisphere 161.1
1794 Male, age 80, right hemisphere 149.2
1841 Female, age 85, right hemisphere 145.8
2521 Female, age 94, right hemisphere 125.9
2848 Male, age 76, right hemisphere 102.9
Subiculum
nTPM: 133.2
2619 Male, age 74, both hemispheres 142.6
1977 Female, age 85, both hemispheres 142.1
2729 Female, age 91, right hemisphere 140.1
1901 Male, age 80, both hemispheres 137.1
2042 Male, age 76, both hemispheres 131.9
2438 Female, age 94, left hemisphere 105.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 157.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 157.4
Samples: 197

Max nTPM: 284.8
Min nTPM: 54.6
Std nTPM: 38.2
Median nTPM: 158.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 284.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 260.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 255.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 249.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 244.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 239.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 239.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 235.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 231.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 226.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 223.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.5
FF:10153-102I9 76 years, female 74.5
FF:10169-103B7 60 years, female 66.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 113.8
Pig sample Sample description nTPM
Subiculum
nTPM: 99.0
Samples: 4

Max nTPM: 130.5
Min nTPM: 81.8
Sample A Female 130.5
Sample B Female 95.4
Sample C Male 88.2
Sample D Male 81.8
Dorsal hippocampus
nTPM: 113.8
Samples: 4

Max nTPM: 156.7
Min nTPM: 86.0
Sample A Female 156.7
Sample B Female 114.4
Sample C Male 97.9
Sample D Male 86.0
Entorhinal cortex
nTPM: 94.4
Samples: 4

Max nTPM: 103.8
Min nTPM: 72.8
Sample A Female 99.7
Sample B Female 103.8
Sample C Male 101.2
Sample D Male 72.8
Ventral hippocampus
nTPM: 111.8
Samples: 4

Max nTPM: 138.6
Min nTPM: 79.9
Sample A Female 123.6
Sample B Female 79.9
Sample C Male 138.6
Sample D Male 105.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 359.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 342.3
Samples: 4

Max nTPM: 374.1
Min nTPM: 314.0
Sample A Male 314.0
Sample B Male 335.6
Sample C Female 345.6
Sample D Female 374.1
Hippocampal formation
nTPM: 359.8
Samples: 4

Max nTPM: 388.8
Min nTPM: 328.2
Sample A Male 349.2
Sample B Male 328.2
Sample C Female 388.8
Sample D Female 372.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.4
513 Antisense, RP_Baylor_102825, Mouse strain C57BL/6J (56 days, male) 12.4
512 Antisense, RP_Baylor_102825, Mouse strain C57BL/6J (56 days, male) 10.3

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