HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:8.9 nTPM
HPA Brain:58.1 nTPM
GTEx:8.9 nTPM
FANTOM5:67.1 Scaled Tags Per Million
Pig:74.6 nTPM
Mouse:23.9 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027569
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.1
Sample id Sample description nTPM
Hippocampus
nTPM: 49.5
1898 Male, age 80, left hemisphere 58.1
2529 Female, age 94, left hemisphere 51.3
2621 Female, age 67, right hemisphere 50.2
1855 Male, age 76, left hemisphere 48.6
2148 Female, age 91, left hemisphere 45.2
1911 Female, age 85, right hemisphere 43.9
Dentate gyrus
nTPM: 47.0
1927 Female, age 91, both hemispheres 54.6
2530 Female, age 94, left hemisphere 49.2
2246 Female, age 85, both hemispheres 48.6
2010 Male, age 76, both hemispheres 47.1
2528 Male, age 74, both hemispheres 46.0
2531 Female, age 67, both hemispheres 36.4
Entorhinal gyrus
nTPM: 51.5
1938 Female, age 85, left hemisphere 56.4
1787 Male, age 76, left hemisphere 53.9
2613 Female, age 94, left hemisphere 51.8
2117 Female, age 91, right hemisphere 50.9
2764 Male, age 80, right hemisphere 48.8
2686 Male, age 75, right hemisphere 47.3
Hippocampus, CA1
nTPM: 50.2
2749 Male, age 80, left hemisphere 61.2
2527 Male, age 74, both hemispheres 54.0
1873 Female, age 85, both hemispheres 50.0
2045 Male, age 76, both hemispheres 44.2
2082 Female, age 91, right hemisphere 41.8
Hippocampus, CA2
nTPM: 52.3
1963 Male, age 80, left hemisphere 59.3
1892 Male, age 76, both hemispheres 55.3
1940 Female, age 85, left hemisphere 52.6
2437 Female, age 94, left hemisphere 50.3
2113 Female, age 91, right hemisphere 49.4
2249 Male, age 74, both hemispheres 46.9
Hippocampus, CA3
nTPM: 48.3
2137 Male, age 80, left hemisphere 58.2
2436 Male, age 74, both hemispheres 51.4
1867 Male, age 76, both hemispheres 48.1
1891 Female, age 85, both hemispheres 45.2
2620 Female, age 94, left hemisphere 44.6
2861 Female, age 67, both hemispheres 42.6
Parahippocampal cortex
nTPM: 51.2
1850 Male, age 80, both hemispheres 58.7
2250 Female, age 67, right hemisphere 55.5
1933 Female, age 85, both hemispheres 55.3
2693 Female, age 94, both hemispheres 52.2
1990 Female, age 91, right hemisphere 50.2
2245 Female, age 91, both hemispheres 50.1
2692 Male, age 74, both hemispheres 49.5
2622 Female, age 67, right hemisphere 49.1
2018 Male, age 76, both hemispheres 46.8
2532 Female, age 72, left hemisphere 44.9
Perirhinal gyrus
nTPM: 58.1
1847 Female, age 91, left hemisphere 63.6
1794 Male, age 80, right hemisphere 60.3
1841 Female, age 85, right hemisphere 59.4
2848 Male, age 76, right hemisphere 54.4
2521 Female, age 94, right hemisphere 52.7
Subiculum
nTPM: 49.5
2438 Female, age 94, left hemisphere 58.1
2729 Female, age 91, right hemisphere 50.0
2619 Male, age 74, both hemispheres 49.8
1977 Female, age 85, both hemispheres 48.9
1901 Male, age 80, both hemispheres 48.0
2042 Male, age 76, both hemispheres 42.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.9
Samples: 197

Max nTPM: 14.6
Min nTPM: 4.6
Std nTPM: 1.9
Median nTPM: 8.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 14.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 13.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 13.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 13.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 12.8
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 12.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 12.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 12.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 12.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 12.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 12.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.1
FF:10169-103B7 60 years, female 74.7
FF:10153-102I9 76 years, female 59.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 74.6
Pig sample Sample description nTPM
Subiculum
nTPM: 72.9
Samples: 4

Max nTPM: 80.3
Min nTPM: 65.3
Sample A Female 80.3
Sample B Female 65.3
Sample C Male 78.0
Sample D Male 67.8
Dorsal hippocampus
nTPM: 64.1
Samples: 4

Max nTPM: 72.2
Min nTPM: 44.5
Sample A Female 71.5
Sample B Female 68.2
Sample C Male 72.2
Sample D Male 44.5
Entorhinal cortex
nTPM: 74.6
Samples: 4

Max nTPM: 79.0
Min nTPM: 69.2
Sample A Female 72.4
Sample B Female 77.7
Sample C Male 79.0
Sample D Male 69.2
Ventral hippocampus
nTPM: 65.5
Samples: 4

Max nTPM: 74.6
Min nTPM: 56.2
Sample A Female 74.6
Sample B Female 56.2
Sample C Male 69.2
Sample D Male 62.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.9
Samples: 4

Max nTPM: 31.4
Min nTPM: 20.9
Sample A Male 20.9
Sample B Male 21.8
Sample C Female 21.3
Sample D Female 31.4
Hippocampal formation
nTPM: 17.7
Samples: 4

Max nTPM: 20.4
Min nTPM: 14.9
Sample A Male 16.7
Sample B Male 18.9
Sample C Female 20.4
Sample D Female 14.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
70785726 Antisense, RP_050706_02_D10, Mouse strain C57BL/6J (56 days, male) 1.1

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