We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RPL38
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields ยป
Search result

 
Field
All
Term
Gene name
Class
Blood group antigen proteins
Subclass
 
Class
 
Keyword
Chromosome
External id
Tissue
 
Cell type
 
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
 
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Yes
Protein structure
In atlas
Column
Gene


                        • SPECIFICITY
                        • DISTRIBUTION
                        • EXPRESSION
                        • SPECIFICITY
                        • DISTRIBUTION
                        • EXPRESSION
                        • SPECIFICITY
                        • DISTRIBUTION
                        • EXPRESSION
                        • SPECIFICITY
                        • DISTRIBUTION
                        • EXPRESSION
                        • SPECIFICITY
                        • DISTRIBUTION
                        • EXPRESSION
                          • SPECIFICITY
                          • DISTRIBUTION
                          • EXPRESSION
                          • SPECIFICITY
                          • DISTRIBUTION
                          • EXPRESSION
                          • SPECIFICITY
                          • DISTRIBUTION
                          • EXPRESSION
                          • RELIABILITY
                          • SUBCELLULAR VARIATION
                          • MULTILOCALIZATION
                          • OTHER
                          • SPECIFICITY
                          • DISTRIBUTION
                          • EXPRESSION
                          • Check all
                          • Uncheck all
                                  • SUMMARY

                                  • TISSUE

                                  • BRAIN

                                  • SINGLE CELL

                                  • TISSUE CELL

                                  • PATHOLOGY

                                  • DISEASE

                                  • IMMUNE

                                  • BLOOD

                                  • SUBCELL

                                  • CELL LINE

                                  • STRUCTURE

                                  • INTERACTION

                                  • RPL38
                                  BRAIN MEDULLA OBLONGATA Show tissue menu
                                  AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
                                  MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
                                  ANTIBODIES
                                  AND
                                  VALIDATION
                                  Brain proteome
                                  Medulla oblongata
                                  MEDULLA OBLONGATA - Expression summary
                                  Protein expressioni

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  No data
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  HPA Brain:609.9 nTPM
                                  FANTOM5:810.2 Scaled Tags Per Million
                                  Pig:338.6 nTPM

                                  MEDULLA OBLONGATA - HPA Brain RNA-seq
                                  Max nTPM 609.9
                                  Sample id Sample description nTPM
                                  Area postrema
                                  nTPM: 471.9
                                  2306 Male, age 80, both hemispheres 537.8
                                  2799 Male, age 61, both hemispheres 536.4
                                  2054 Male, age 76, both hemispheres 341.4
                                  Dorsal medullary reticular nucleus
                                  nTPM: 439.3
                                  2373 Male, age 61, both hemispheres 505.6
                                  2040 Female, age 85, both hemispheres 454.8
                                  2088 Male, age 76, both hemispheres 357.4
                                  Dorsal motor vagal complex
                                  nTPM: 490.2
                                  2797 Male, age 61, both hemispheres 747.0
                                  2643 Male, age 74, both hemispheres 550.6
                                  2807 Female, age 85, both hemispheres 501.3
                                  2813 Female, age 72, unknown 448.8
                                  2133 Female, age 91, both hemispheres 438.8
                                  2185 Male, age 76, both hemispheres 416.4
                                  2000 Male, age 74, unknown 416.2
                                  2844 Male, age 55, unknown 402.1
                                  Gigantocellular reticular nuclei, medullary
                                  nTPM: 488.7
                                  2314 Male, age 61, both hemispheres 662.7
                                  1876 Female, age 85, both hemispheres 527.4
                                  2387 Female, age 91, both hemispheres 493.2
                                  2310 Male, age 80, both hemispheres 467.8
                                  2022 Male, age 76, right hemisphere 412.8
                                  2462 Male, age 74, both hemispheres 368.2
                                  Gigantocellular reticular nuclei, pars
                                  nTPM: 485.5
                                  2168 Male, age 76, both hemispheres 523.9
                                  2336 Male, age 61, both hemispheres 489.9
                                  2084 Female, age 85, both hemispheres 480.0
                                  2706 Male, age 80, both hemispheres 478.6
                                  2330 Male, age 80, both hemispheres 455.4
                                  Inferior olive
                                  nTPM: 546.0
                                  2628 Female, age 91, both hemispheres 618.7
                                  2178 Male, age 61, both hemispheres 596.2
                                  2563 Male, age 74, both hemispheres 556.6
                                  2085 Female, age 85, both hemispheres 509.1
                                  2379 Male, age 80, both hemispheres 449.4
                                  Lateral medullary reticular nucleus
                                  nTPM: 553.5
                                  2374 Male, age 61, both hemispheres 622.5
                                  2852 Male, age 80, both hemispheres 605.5
                                  2190 Female, age 85, both hemispheres 577.9
                                  2804 Female, age 91, both hemispheres 561.6
                                  2305 Male, age 74, both hemispheres 513.2
                                  2044 Male, age 76, both hemispheres 440.0
                                  Medial olivary nucleus
                                  nTPM: 609.9
                                  2851 Male, age 80, both hemispheres 663.7
                                  1943 Male, age 61, both hemispheres 654.9
                                  1962 Male, age 76, both hemispheres 607.9
                                  2138 Female, age 91, both hemispheres 513.1
                                  Medial vestibular nucleus
                                  nTPM: 523.6
                                  2803 Female, age 91, both hemispheres 667.4
                                  2624 Male, age 61, both hemispheres 640.2
                                  2801 Male, age 74, both hemispheres 565.0
                                  2093 Male, age 80, both hemispheres 478.2
                                  2743 Female, age 85, both hemispheres 424.2
                                  2134 Male, age 76, both hemispheres 366.8
                                  Motor hypoglossal nucleus
                                  nTPM: 483.3
                                  2132 Female, age 85, both hemispheres 596.3
                                  2182 Male, age 80, both hemispheres 580.3
                                  2125 Female, age 91, both hemispheres 540.2
                                  2461 Male, age 61, both hemispheres 413.0
                                  2277 Male, age 76, both hemispheres 286.8
                                  Nucleus ambiguus
                                  nTPM: 380.8
                                  2071 Male, age 76, both hemispheres 476.9
                                  2096 Female, age 85, both hemispheres 284.7
                                  Nucleus cuneatus
                                  nTPM: 472.2
                                  2808 Female, age 85, both hemispheres 636.5
                                  2381 Male, age 80, both hemispheres 521.5
                                  2805 Female, age 91, both hemispheres 520.1
                                  2380 Male, age 80, both hemispheres 485.8
                                  2562 Male, age 61, both hemispheres 477.3
                                  2564 Male, age 74, both hemispheres 451.5
                                  2376 Male, age 61, both hemispheres 450.6
                                  2100 Male, age 76, both hemispheres 367.0
                                  2131 Male, age 76, both hemispheres 339.8
                                  Nucleus gracilis
                                  nTPM: 552.9
                                  2382 Male, age 80, both hemispheres 588.8
                                  2627 Male, age 74, both hemispheres 583.4
                                  2299 Female, age 85, both hemispheres 486.4
                                  Nucleus raphe obscurus
                                  nTPM: 599.8
                                  2845 Female, age 85, midline 684.6
                                  2800 Male, age 61, midline 609.7
                                  2142 Male, age 76, midline 505.0
                                  Nucleus raphe pallidus
                                  nTPM: 561.2
                                  1924 Male, age 61, midline 621.9
                                  2183 Male, age 80, midline 577.8
                                  2145 Male, age 76, midline 484.0
                                  Nucleus tractus solitarii
                                  nTPM: 380.3
                                  2191 Female, age 85, both hemispheres 503.5
                                  2307 Male, age 80, both hemispheres 347.9
                                  2656 Male, age 76, both hemispheres 337.6
                                  2144 Female, age 91, right hemisphere 332.2
                                  Parvicellular reticular nuclei
                                  nTPM: 497.9
                                  2095 Male, age 76, both hemispheres 558.2
                                  2119 Male, age 80, both hemispheres 501.9
                                  2558 Male, age 74, both hemispheres 433.5
                                  Parvicellular reticular nuclei, medullary
                                  nTPM: 486.6
                                  2189 Female, age 91, both hemispheres 537.6
                                  2181 Male, age 80, left hemisphere 472.1
                                  2091 Female, age 85, both hemispheres 450.2
                                  Peritrigeminal nucleus
                                  nTPM: 513.7
                                  2067 Female, age 85, both hemispheres 546.5
                                  2136 Male, age 76, both hemispheres 533.0
                                  2179 Male, age 61, both hemispheres 461.5
                                  Prepositus hypoglossal nucleus
                                  nTPM: 508.5
                                  2855 Female, age 85, right hemisphere 589.1
                                  2086 Male, age 80, both hemispheres 427.9
                                  Spinal trigeminal nucleus, caudal
                                  nTPM: 477.8
                                  2312 Male, age 61, both hemispheres 539.3
                                  2390 Female, age 91, both hemispheres 517.6
                                  2308 Male, age 80, both hemispheres 496.1
                                  2642 Male, age 74, both hemispheres 485.3
                                  2447 Male, age 76, both hemispheres 350.6
                                  Spinal trigeminal nucleus, interpolar
                                  nTPM: 487.8
                                  2389 Female, age 91, both hemispheres 542.1
                                  2033 Male, age 80, both hemispheres 510.8
                                  2625 Male, age 61, both hemispheres 509.6
                                  2066 Male, age 76, right hemisphere 464.2
                                  2386 Female, age 85, both hemispheres 412.2
                                  Spinal vestibular nucleus
                                  nTPM: 583.2
                                  2796 Male, age 61, both hemispheres 662.2
                                  2806 Female, age 85, both hemispheres 656.0
                                  2384 Male, age 74, both hemispheres 585.2
                                  2748 Male, age 76, both hemispheres 539.4
                                  2186 Female, age 91, both hemispheres 534.0
                                  2780 Male, age 80, both hemispheres 522.4
                                  Superior vestibular nucleus
                                  nTPM: 489.6
                                  2383 Male, age 74, both hemispheres 534.1
                                  2015 Male, age 80, both hemispheres 509.0
                                  2061 Male, age 76, both hemispheres 425.8
                                  Ventral medullary reticular nucleus
                                  nTPM: 470.1
                                  2372 Male, age 61, both hemispheres 531.7
                                  2060 Male, age 76, both hemispheres 408.6
                                  Ventrolateral medulla, A1-C1 cell groups
                                  nTPM: 515.7
                                  2118 Male, age 80, both hemispheres 573.2
                                  2180 Male, age 61, both hemispheres 554.4
                                  2302 Female, age 91, both hemispheres 521.3
                                  1986 Male, age 76, both hemispheres 481.8
                                  2741 Female, age 85, both hemispheres 447.9

                                  MEDULLA OBLONGATA - FANTOM5 CAGEi

                                  RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                  Max Scaled Tags Per Million 810.2
                                  FANTOM5 sample id Sample description Scaled Tags Per Million
                                  Medulla oblongata
                                  Scaled Tags Per Million: 810.2
                                  FF:10174-103C3 60 years, female 1371.5
                                  FF:10155-103A2 76 years, female 732.1
                                  FF:10038-101F2 18-64 years, mixed 326.9

                                  MEDULLA OBLONGATA - Pig RNA-seqi

                                  RNA-seq data obtained from pig brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 338.6
                                  Pig sample Sample description nTPM
                                  307.1347.3378.8269.5390.3050100150200250300350
                                  307.1347.3378.8269.5390.3050100150200250300350
                                  Medulla oblongata
                                  nTPM: 338.6
                                  Samples: 4

                                  Max nTPM: 390.3
                                  Min nTPM: 269.5
                                  Sample A Female 319.6
                                  Sample B Female 269.5
                                  Sample C Male 374.9
                                  Sample D Male 390.3

                                  Contact

                                  • NEWS ARTICLES
                                  • PRESS ROOM

                                  The Project

                                  • INTRODUCTION
                                  • ORGANIZATION
                                  • PUBLICATIONS

                                  The Human Protein Atlas

                                  • DOWNLOADABLE DATA
                                  • LICENCE & CITATION
                                  • HELP & FAQ
                                  The Human Protein Atlas project is funded
                                  by the Knut & Alice Wallenberg Foundation.


                                  contact@proteinatlas.org