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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
579.5
nTPM
FANTOM5:
1051.4
Scaled Tags Per Million
Pig:
368.4
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
579.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 559.9
2188
Female, age 91, both hemispheres
746.9
2090
Male, age 80, both hemispheres
573.2
2301
Female, age 85, both hemispheres
534.2
1984
Male, age 76, both hemispheres
385.5
Dorsal cochlear nucleus nTPM: 469.9
2187
Female, age 91, both hemispheres
631.7
2802
Male, age 74, right hemisphere
506.6
2370
Male, age 61, both hemispheres
455.8
2378
Male, age 80, both hemispheres
414.3
2058
Male, age 76, both hemispheres
341.1
Dorsal tegmental nucleus nTPM: 538.6
2083
Male, age 80, both hemispheres
572.1
2326
Male, age 74, both hemispheres
548.4
2358
Male, age 61, both hemispheres
536.7
1936
Male, age 76, left hemisphere
497.3
Dorsolateral tegmental area nTPM: 542.5
2337
Male, age 61, both hemispheres
674.9
2654
Male, age 80, both hemispheres
588.4
2751
Female, age 85, both hemispheres
561.1
2360
Male, age 74, both hemispheres
447.0
2141
Male, age 76, both hemispheres
440.9
Kolliker-Fuse nucleus nTPM: 579.5
2793
Female, age 91, left hemisphere
711.2
2163
Male, age 80, both hemispheres
521.5
2315
Male, age 76, right hemisphere
505.9
Lateral lemniscal nuclei nTPM: 462.1
2320
Female, age 91, left hemisphere
526.8
2169
Male, age 76, both hemispheres
508.7
2453
Male, age 74, right hemisphere
471.2
2746
Female, age 85, left hemisphere
411.4
2036
Male, age 80, both hemispheres
392.4
Lateral parabrachial nucleus nTPM: 525.4
2792
Male, age 76, both hemispheres
675.1
2139
Female, age 85, right hemisphere
497.4
2013
Male, age 80, both hemispheres
492.2
2790
Male, age 61, both hemispheres
436.8
Lateral vestibular nucleus nTPM: 486.8
2311
Male, age 80, both hemispheres
546.8
2184
Male, age 76, both hemispheres
426.7
Locus coeruleus nTPM: 421.3
2720
Male, age 74, both hemispheres
586.2
2162
Male, age 80, both hemispheres
484.3
2123
Female, age 91, both hemispheres
425.5
2788
Male, age 74, unknown
402.8
2014
Male, age 55, unknown
382.4
2317
Female, age 72, unknown
347.8
1980
Male, age 76, both hemispheres
320.0
Medial parabrachial nucleus nTPM: 577.9
2170
Female, age 91, both hemispheres
772.2
2854
Male, age 80, both hemispheres
692.4
2786
Male, age 76, both hemispheres
496.3
2156
Male, age 61, both hemispheres
487.7
2463
Female, age 85, right hemisphere
441.0
Medial periolivary nuclei nTPM: 461.4
2458
Female, age 91, both hemispheres
542.5
2063
Male, age 76, both hemispheres
476.1
2171
Female, age 85, both hemispheres
443.6
2081
Male, age 80, both hemispheres
433.7
2791
Male, age 74, right hemisphere
411.1
Motor facial nucleus nTPM: 477.6
2697
Female, age 85, both hemispheres
609.1
2365
Male, age 74, right hemisphere
479.3
2795
Female, age 91, both hemispheres
468.1
2062
Male, age 76, both hemispheres
454.6
2126
Male, age 61, both hemispheres
444.0
2327
Male, age 80, both hemispheres
410.4
Motor trigeminal nucleus nTPM: 492.3
2321
Female, age 91, both hemispheres
558.7
2335
Male, age 61, both hemispheres
512.8
2560
Male, age 74, both hemispheres
478.2
2309
Male, age 76, both hemispheres
456.1
2079
Male, age 80, both hemispheres
455.9
Nuclei of the trapezoid body nTPM: 468.9
1983
Male, age 76, both hemispheres
622.8
2166
Male, age 80, both hemispheres
499.6
2159
Male, age 61, both hemispheres
421.2
2368
Female, age 91, both hemispheres
417.1
2735
Female, age 85, both hemispheres
383.7
Nucleus raphe magnus nTPM: 460.3
2455
Male, age 74, both hemispheres
494.5
2328
Male, age 80, both hemispheres
476.0
2051
Male, age 76, both hemispheres
469.4
2459
Female, age 91, both hemispheres
457.6
2172
Female, age 85, both hemispheres
456.9
2160
Male, age 61, both hemispheres
407.2
Paramedian reticular nucleus nTPM: 486.5
2052
Male, age 76, both hemispheres
602.6
2050
Female, age 85, both hemispheres
483.8
2313
Male, age 61, both hemispheres
442.1
2057
Male, age 80, both hemispheres
417.4
Pedunculopontine tegmental nucleus nTPM: 531.9
2338
Male, age 61, both hemispheres
642.6
2334
Male, age 80, both hemispheres
542.4
1921
Female, age 85, both hemispheres
410.7
Pontine nuclei nTPM: 502.0
2319
Female, age 91, both hemispheres
622.6
2454
Male, age 74, left hemisphere
566.1
1863
Male, age 55, unknown
550.3
2787
Female, age 85, both hemispheres
518.5
1968
Male, age 76, left hemisphere
504.6
2115
Male, age 80, left hemisphere
468.6
2109
Female, age 72, unknown
439.9
2727
Male, age 61, right hemisphere
345.7
Pontine raphe nucleus nTPM: 452.4
2122
Female, age 85, midline
479.8
2853
Male, age 76, midline
425.0
Posteroventral cochlear nucleus nTPM: 566.8
2135
Female, age 91, both hemispheres
736.2
2341
Male, age 80, both hemispheres
734.7
2371
Male, age 61, both hemispheres
504.9
2752
Female, age 85, both hemispheres
445.5
2070
Male, age 76, both hemispheres
412.8
Principal sensory trigeminal nucleus nTPM: 447.3
2367
Female, age 91, left hemisphere
542.8
2158
Male, age 61, both hemispheres
449.2
2324
Male, age 76, both hemispheres
429.7
2008
Male, age 80, left hemisphere
367.7
Reticular pontine nucleus, caudal nTPM: 536.4
2559
Male, age 74, both hemispheres
603.1
2457
Female, age 91, both hemispheres
587.5
2092
Male, age 76, both hemispheres
577.7
2332
Male, age 80, right hemisphere
377.4
Reticular pontine nucleus, oral nTPM: 553.6
2366
Female, age 91, both hemispheres
734.7
1939
Male, age 80, both hemispheres
553.0
2167
Male, age 76, both hemispheres
515.4
2361
Male, age 74, both hemispheres
507.5
2012
Female, age 85, both hemispheres
457.4
Reticulotegmental nucleus nTPM: 483.8
2452
Male, age 74, both hemispheres
537.5
2322
Female, age 91, both hemispheres
481.0
2333
Male, age 80, both hemispheres
477.2
2325
Male, age 76, both hemispheres
439.4
Spinal trigeminal nucleus, oral nTPM: 443.5
2164
Male, age 80, both hemispheres
484.9
1978
Male, age 76, both hemispheres
452.5
2737
Female, age 85, both hemispheres
393.1
Subcoeruleus area nTPM: 510.9
2369
Female, age 85, left hemisphere
567.5
2451
Male, age 74, both hemispheres
560.1
1958
Male, age 80, both hemispheres
536.6
2089
Male, age 76, left hemisphere
454.1
2323
Female, age 91, left hemisphere
436.2
Superior olive nTPM: 472.3
2020
Male, age 76, both hemispheres
573.6
2561
Female, age 91, both hemispheres
490.2
1875
Female, age 85, both hemispheres
439.1
2364
Male, age 74, right hemisphere
435.7
2329
Male, age 80, right hemisphere
422.9
Ventral periolivary nuclei nTPM: 491.2
2794
Female, age 91, left hemisphere
535.0
2023
Male, age 76, both hemispheres
529.9
2165
Male, age 80, both hemispheres
511.5
2130
Female, age 85, both hemispheres
388.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 476.1
2840
Female, age 85, both hemispheres
541.7
1959
Male, age 76, both hemispheres
535.9
2161
Male, age 80, both hemispheres
490.7
2359
Male, age 61, both hemispheres
449.8
2456
Female, age 91, both hemispheres
440.2
2449
Male, age 74, both hemispheres
398.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
