HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:101.2 nTPM
HPA Brain:68.2 nTPM
GTEx:101.2 nTPM
FANTOM5:50.1 Scaled Tags Per Million
Pig:71.3 nTPM
Mouse:54.9 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 68.2
Sample id Sample description nTPM
Hippocampus
nTPM: 68.2
2529 Female, age 94, left hemisphere 75.5
2621 Female, age 67, right hemisphere 73.5
2148 Female, age 91, left hemisphere 73.3
1898 Male, age 80, left hemisphere 64.0
1855 Male, age 76, left hemisphere 63.8
1911 Female, age 85, right hemisphere 59.2
Dentate gyrus
nTPM: 59.3
2530 Female, age 94, left hemisphere 74.3
2010 Male, age 76, both hemispheres 61.4
2531 Female, age 67, both hemispheres 59.7
2528 Male, age 74, both hemispheres 56.6
2246 Female, age 85, both hemispheres 53.5
1927 Female, age 91, both hemispheres 50.1
Entorhinal gyrus
nTPM: 59.1
2117 Female, age 91, right hemisphere 78.2
2686 Male, age 75, right hemisphere 70.1
1787 Male, age 76, left hemisphere 55.2
2613 Female, age 94, left hemisphere 53.2
2764 Male, age 80, right hemisphere 51.1
1938 Female, age 85, left hemisphere 47.1
Hippocampus, CA1
nTPM: 50.9
1873 Female, age 85, both hemispheres 58.7
2527 Male, age 74, both hemispheres 57.7
2045 Male, age 76, both hemispheres 50.6
2082 Female, age 91, right hemisphere 48.9
2749 Male, age 80, left hemisphere 38.5
Hippocampus, CA2
nTPM: 54.6
1963 Male, age 80, left hemisphere 63.3
2437 Female, age 94, left hemisphere 60.3
1940 Female, age 85, left hemisphere 54.4
2113 Female, age 91, right hemisphere 51.0
2249 Male, age 74, both hemispheres 51.0
1892 Male, age 76, both hemispheres 47.7
Hippocampus, CA3
nTPM: 61.0
2861 Female, age 67, both hemispheres 105.9
1891 Female, age 85, both hemispheres 60.4
2620 Female, age 94, left hemisphere 57.6
2436 Male, age 74, both hemispheres 57.5
1867 Male, age 76, both hemispheres 50.0
2137 Male, age 80, left hemisphere 34.7
Parahippocampal cortex
nTPM: 57.9
2622 Female, age 67, right hemisphere 83.0
2692 Male, age 74, both hemispheres 71.5
2018 Male, age 76, both hemispheres 68.6
2245 Female, age 91, both hemispheres 59.5
2250 Female, age 67, right hemisphere 54.2
1990 Female, age 91, right hemisphere 52.8
2532 Female, age 72, left hemisphere 48.9
2693 Female, age 94, both hemispheres 48.7
1933 Female, age 85, both hemispheres 46.3
1850 Male, age 80, both hemispheres 45.2
Perirhinal gyrus
nTPM: 43.6
2848 Male, age 76, right hemisphere 47.2
1847 Female, age 91, left hemisphere 45.7
1794 Male, age 80, right hemisphere 43.6
1841 Female, age 85, right hemisphere 41.0
2521 Female, age 94, right hemisphere 40.6
Subiculum
nTPM: 63.4
2729 Female, age 91, right hemisphere 80.2
2619 Male, age 74, both hemispheres 72.3
2042 Male, age 76, both hemispheres 68.2
2438 Female, age 94, left hemisphere 62.6
1901 Male, age 80, both hemispheres 51.0
1977 Female, age 85, both hemispheres 46.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 101.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 101.2
Samples: 197

Max nTPM: 218.4
Min nTPM: 36.3
Std nTPM: 30.8
Median nTPM: 96.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 218.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 192.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 177.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 174.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 170.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 166.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 164.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 163.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 160.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 160.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 159.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.1
FF:10153-102I9 76 years, female 71.3
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.3
Pig sample Sample description nTPM
Subiculum
nTPM: 69.7
Samples: 4

Max nTPM: 89.9
Min nTPM: 59.5
Sample A Female 89.9
Sample B Female 61.3
Sample C Male 68.2
Sample D Male 59.5
Dorsal hippocampus
nTPM: 50.8
Samples: 4

Max nTPM: 66.1
Min nTPM: 36.3
Sample A Female 57.3
Sample B Female 43.3
Sample C Male 66.1
Sample D Male 36.3
Entorhinal cortex
nTPM: 71.4
Samples: 4

Max nTPM: 84.8
Min nTPM: 64.5
Sample A Female 64.9
Sample B Female 71.2
Sample C Male 84.8
Sample D Male 64.5
Ventral hippocampus
nTPM: 59.7
Samples: 4

Max nTPM: 91.2
Min nTPM: 46.4
Sample A Female 52.1
Sample B Female 49.0
Sample C Male 91.2
Sample D Male 46.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.9
Samples: 4

Max nTPM: 56.7
Min nTPM: 53.5
Sample A Male 56.7
Sample B Male 54.8
Sample C Female 53.5
Sample D Female 54.6
Hippocampal formation
nTPM: 47.8
Samples: 4

Max nTPM: 53.1
Min nTPM: 40.9
Sample A Male 53.1
Sample B Male 48.0
Sample C Female 40.9
Sample D Female 49.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
75079746 Antisense, RP_060412_02_F02, Mouse strain C57BL/6J (56 days, male) 0.9
75694242 Antisense, RP_060412_02_F02, Mouse strain C57BL/6J (56 days, male) 0.8

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