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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
339.8
nTPM
GTEx:
339.8
nTPM
FANTOM5:
22.3
Scaled Tags Per Million
Pig:
171.3
nTPM
Mouse:
904.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
339.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 339.8
Samples: 105
Max nTPM: 544.1
Min nTPM: 120.3
Std nTPM: 84.8
Median nTPM: 0.0
6_1
73 years, female
544.1
321_1
62 years, female
529.8
153_1
70 years, female
508.4
320_1
89 years, female
504.7
322_1
76 years, male
501.3
389_1
86 years, female
497.0
120_1
70 years, female
475.1
319_1
81 years, male
473.1
335_1
73 years, female
467.5
35_1
74 years, female
465.4
137_1
83 years, male
465.2
17_1
71 years, male
460.5
126_1
63 years, male
444.0
2_1
77 years, female
439.8
115_1
83 years, male
439.7
246_1
77 years, male
436.5
404_1
82 years, female
434.8
376_1
75 years, female
433.6
41_1
94 years, female
432.5
405_1
91 years, male
428.8
18_1
88 years, male
422.0
145_1
84 years, male
414.3
318_1
68 years, male
413.4
99_1
64 years, male
410.2
189_1
76 years, male
400.9
526_1
61 years, male
400.9
317_1
60 years, male
399.7
347_1
72 years, male
398.8
355_1
70 years, female
396.9
251_1
78 years, male
383.1
406_1
79 years, male
383.1
139_1
64 years, female
382.5
109_1
81 years, female
381.1
425_1
59 years, female
377.3
452_1
88 years, female
374.7
384_1
83 years, male
369.2
503_1
68 years, male
362.9
517_1
88 years, male
362.3
243_1
75 years, male
361.2
218_1
71 years, female
356.3
311_1
78 years, male
347.7
447_1
81 years, male
345.3
495_1
57 years, female
341.8
352_1
62 years, male
339.5
4_1
88 years, female
338.9
396_1
62 years, male
338.4
394_1
75 years, female
337.7
506_1
65 years, male
337.7
377_1
82 years, female
336.6
468_1
89 years, male
336.5
229_1
69 years, female
335.3
173_1
67 years, male
335.0
316_1
62 years, male
333.2
81_1
67 years, male
330.6
9_1
66 years, female
329.2
348_1
84 years, male
326.7
307_1
66 years, female
326.3
286_1
68 years, female
322.4
386_1
76 years, male
322.4
353_1
82 years, female
316.1
518_1
75 years, female
315.3
379_1
60 years, male
313.3
163_1
78 years, male
312.4
162_1
79 years, female
307.6
324_1
76 years, male
303.1
117_1
61 years, male
302.9
254_1
77 years, female
301.5
480_1
63 years, male
299.9
266_1
85 years, male
298.8
295_1
61 years, female
298.7
217_1
76 years, male
298.0
32_1
67 years, male
296.8
288_1
66 years, female
293.1
350_1
84 years, female
291.8
291_1
76 years, male
291.5
237_1
82 years, male
290.9
172_1
72 years, female
287.8
293_1
68 years, female
287.5
354_1
81 years, female
279.6
177_1
74 years, male
277.3
265_1
87 years, male
276.9
119_1
70 years, female
276.3
142_1
61 years, female
274.0
499_1
55 years, female
273.5
42_1
85 years, male
272.6
292_1
71 years, male
269.9
356_1
87 years, female
269.5
415_1
77 years, female
263.8
308_1
70 years, female
258.8
314_1
67 years, male
255.9
315_1
62 years, female
255.7
375_1
74 years, female
253.1
349_1
83 years, male
244.4
414_1
84 years, female
243.2
313_1
79 years, female
242.5
466_1
57 years, female
241.2
43_1
64 years, female
240.7
89_1
63 years, male
240.3
264_1
73 years, female
211.8
149_1
88 years, male
211.4
351_1
91 years, male
198.9
501_1
88 years, male
192.1
413_1
59 years, female
176.9
491_1
89 years, female
155.6
490_1
67 years, female
120.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.