HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:14.9 nTPM
HPA Brain:28.2 nTPM
GTEx:14.9 nTPM
FANTOM5:68.1 Scaled Tags Per Million
Pig:14.2 nTPM
Mouse:15.9 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058283
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.2
Sample id Sample description nTPM
Hippocampus
nTPM: 24.7
2148 Female, age 91, left hemisphere 30.4
2621 Female, age 67, right hemisphere 27.1
2529 Female, age 94, left hemisphere 25.2
1911 Female, age 85, right hemisphere 23.5
1898 Male, age 80, left hemisphere 22.1
1855 Male, age 76, left hemisphere 19.9
Dentate gyrus
nTPM: 24.3
2531 Female, age 67, both hemispheres 28.5
2528 Male, age 74, both hemispheres 25.4
2530 Female, age 94, left hemisphere 24.4
1927 Female, age 91, both hemispheres 24.3
2246 Female, age 85, both hemispheres 22.8
2010 Male, age 76, both hemispheres 20.1
Entorhinal gyrus
nTPM: 28.2
2764 Male, age 80, right hemisphere 30.9
2613 Female, age 94, left hemisphere 28.9
2686 Male, age 75, right hemisphere 28.6
1938 Female, age 85, left hemisphere 27.7
2117 Female, age 91, right hemisphere 26.9
1787 Male, age 76, left hemisphere 26.3
Hippocampus, CA1
nTPM: 23.9
2082 Female, age 91, right hemisphere 25.9
1873 Female, age 85, both hemispheres 25.2
2749 Male, age 80, left hemisphere 24.5
2527 Male, age 74, both hemispheres 24.0
2045 Male, age 76, both hemispheres 19.9
Hippocampus, CA2
nTPM: 24.5
1940 Female, age 85, left hemisphere 28.4
2249 Male, age 74, both hemispheres 26.7
2113 Female, age 91, right hemisphere 24.5
2437 Female, age 94, left hemisphere 23.3
1963 Male, age 80, left hemisphere 22.8
1892 Male, age 76, both hemispheres 21.5
Hippocampus, CA3
nTPM: 27.6
2620 Female, age 94, left hemisphere 39.7
2861 Female, age 67, both hemispheres 29.4
2436 Male, age 74, both hemispheres 26.2
2137 Male, age 80, left hemisphere 25.7
1891 Female, age 85, both hemispheres 22.8
1867 Male, age 76, both hemispheres 21.6
Parahippocampal cortex
nTPM: 25.1
2622 Female, age 67, right hemisphere 32.7
2693 Female, age 94, both hemispheres 27.6
2532 Female, age 72, left hemisphere 26.3
2692 Male, age 74, both hemispheres 25.8
2250 Female, age 67, right hemisphere 25.6
1850 Male, age 80, both hemispheres 25.5
1990 Female, age 91, right hemisphere 24.1
1933 Female, age 85, both hemispheres 22.9
2245 Female, age 91, both hemispheres 22.1
2018 Male, age 76, both hemispheres 18.9
Perirhinal gyrus
nTPM: 27.9
1794 Male, age 80, right hemisphere 32.1
1847 Female, age 91, left hemisphere 29.7
1841 Female, age 85, right hemisphere 27.1
2521 Female, age 94, right hemisphere 26.6
2848 Male, age 76, right hemisphere 24.1
Subiculum
nTPM: 24.3
2729 Female, age 91, right hemisphere 29.3
2619 Male, age 74, both hemispheres 29.0
1977 Female, age 85, both hemispheres 24.0
1901 Male, age 80, both hemispheres 22.9
2438 Female, age 94, left hemisphere 22.4
2042 Male, age 76, both hemispheres 18.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.9
Samples: 197

Max nTPM: 25.0
Min nTPM: 4.8
Std nTPM: 4.0
Median nTPM: 14.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 25.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 24.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 23.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 23.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 23.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 23.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 23.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 22.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 22.6
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 22.1
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 21.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.1
FF:10169-103B7 60 years, female 72.7
FF:10153-102I9 76 years, female 63.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.2
Pig sample Sample description nTPM
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 20.0
Min nTPM: 11.0
Sample A Female 20.0
Sample B Female 12.2
Sample C Male 12.1
Sample D Male 11.0
Dorsal hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 18.7
Min nTPM: 10.2
Sample A Female 18.7
Sample B Female 12.7
Sample C Male 10.2
Sample D Male 12.6
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 16.8
Min nTPM: 10.5
Sample A Female 16.8
Sample B Female 11.4
Sample C Male 10.7
Sample D Male 10.5
Ventral hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 16.5
Min nTPM: 10.7
Sample A Female 16.5
Sample B Female 10.7
Sample C Male 15.2
Sample D Male 14.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.0
Samples: 4

Max nTPM: 17.6
Min nTPM: 14.8
Sample A Male 14.8
Sample B Male 15.3
Sample C Female 16.1
Sample D Female 17.6
Hippocampal formation
nTPM: 14.2
Samples: 4

Max nTPM: 15.1
Min nTPM: 13.4
Sample A Male 13.6
Sample B Male 13.4
Sample C Female 15.1
Sample D Female 14.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70231230 Antisense, RP_050526_01_F01, Mouse strain C57BL/6J (56 days, male) 0.2

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