HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:87.1 nTPM
HPA Brain:69.7 nTPM
GTEx:87.1 nTPM
FANTOM5:230.7 Scaled Tags Per Million
Pig:113.1 nTPM
Mouse:269.9 nTPM
Allen mouse:27.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039715Antibody HPA040040
Glial cells Not detectedMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.7
Sample id Sample description nTPM
Hippocampus
nTPM: 54.8
1898 Male, age 80, left hemisphere 75.9
2529 Female, age 94, left hemisphere 63.1
2148 Female, age 91, left hemisphere 50.4
1855 Male, age 76, left hemisphere 48.6
2621 Female, age 67, right hemisphere 48.3
1911 Female, age 85, right hemisphere 42.6
Dentate gyrus
nTPM: 54.3
1927 Female, age 91, both hemispheres 63.4
2530 Female, age 94, left hemisphere 63.3
2528 Male, age 74, both hemispheres 58.3
2010 Male, age 76, both hemispheres 54.8
2246 Female, age 85, both hemispheres 46.3
2531 Female, age 67, both hemispheres 39.6
Entorhinal gyrus
nTPM: 56.0
2764 Male, age 80, right hemisphere 73.7
1938 Female, age 85, left hemisphere 58.9
2117 Female, age 91, right hemisphere 57.1
1787 Male, age 76, left hemisphere 55.3
2613 Female, age 94, left hemisphere 51.1
2686 Male, age 75, right hemisphere 40.0
Hippocampus, CA1
nTPM: 59.8
2749 Male, age 80, left hemisphere 91.5
1873 Female, age 85, both hemispheres 62.3
2527 Male, age 74, both hemispheres 59.9
2082 Female, age 91, right hemisphere 43.4
2045 Male, age 76, both hemispheres 41.8
Hippocampus, CA2
nTPM: 60.7
1892 Male, age 76, both hemispheres 76.3
1963 Male, age 80, left hemisphere 72.9
2249 Male, age 74, both hemispheres 64.0
2437 Female, age 94, left hemisphere 57.6
1940 Female, age 85, left hemisphere 49.2
2113 Female, age 91, right hemisphere 44.4
Hippocampus, CA3
nTPM: 52.1
2137 Male, age 80, left hemisphere 67.6
1867 Male, age 76, both hemispheres 60.2
2436 Male, age 74, both hemispheres 54.4
1891 Female, age 85, both hemispheres 47.4
2620 Female, age 94, left hemisphere 46.0
2861 Female, age 67, both hemispheres 37.2
Parahippocampal cortex
nTPM: 54.0
1850 Male, age 80, both hemispheres 75.5
1990 Female, age 91, right hemisphere 61.8
1933 Female, age 85, both hemispheres 59.3
2245 Female, age 91, both hemispheres 58.1
2250 Female, age 67, right hemisphere 55.2
2532 Female, age 72, left hemisphere 53.7
2693 Female, age 94, both hemispheres 51.0
2018 Male, age 76, both hemispheres 47.5
2692 Male, age 74, both hemispheres 39.7
2622 Female, age 67, right hemisphere 38.5
Perirhinal gyrus
nTPM: 69.7
1794 Male, age 80, right hemisphere 83.9
1847 Female, age 91, left hemisphere 83.1
1841 Female, age 85, right hemisphere 65.8
2521 Female, age 94, right hemisphere 58.9
2848 Male, age 76, right hemisphere 56.8
Subiculum
nTPM: 52.8
1901 Male, age 80, both hemispheres 64.9
1977 Female, age 85, both hemispheres 58.7
2619 Male, age 74, both hemispheres 53.7
2438 Female, age 94, left hemisphere 53.1
2729 Female, age 91, right hemisphere 44.6
2042 Male, age 76, both hemispheres 41.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 87.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 87.1
Samples: 197

Max nTPM: 146.0
Min nTPM: 44.0
Std nTPM: 20.8
Median nTPM: 81.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 146.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 145.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 138.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 135.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 133.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 133.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 131.3
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 129.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 129.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 127.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 127.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 230.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 230.7
FF:10169-103B7 60 years, female 268.9
FF:10153-102I9 76 years, female 192.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 113.1
Pig sample Sample description nTPM
Subiculum
nTPM: 95.5
Samples: 4

Max nTPM: 122.5
Min nTPM: 81.5
Sample A Female 122.5
Sample B Female 91.6
Sample C Male 86.4
Sample D Male 81.5
Dorsal hippocampus
nTPM: 113.1
Samples: 4

Max nTPM: 154.0
Min nTPM: 83.4
Sample A Female 154.0
Sample B Female 105.2
Sample C Male 109.7
Sample D Male 83.4
Entorhinal cortex
nTPM: 96.0
Samples: 4

Max nTPM: 109.3
Min nTPM: 77.8
Sample A Female 101.8
Sample B Female 109.3
Sample C Male 95.0
Sample D Male 77.8
Ventral hippocampus
nTPM: 102.4
Samples: 4

Max nTPM: 116.7
Min nTPM: 78.2
Sample A Female 111.2
Sample B Female 78.2
Sample C Male 116.7
Sample D Male 103.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 269.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 250.0
Samples: 4

Max nTPM: 267.1
Min nTPM: 221.3
Sample A Male 249.9
Sample B Male 267.1
Sample C Female 261.8
Sample D Female 221.3
Hippocampal formation
nTPM: 269.9
Samples: 4

Max nTPM: 290.8
Min nTPM: 255.0
Sample A Male 290.8
Sample B Male 265.6
Sample C Female 255.0
Sample D Female 268.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 27.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.2
545090 Antisense, RP_040810_02_H09, Mouse strain C57BL/6J (56 days, male) 27.2

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