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GPR152
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  • GPR152
INTERACTION
Protein interactions
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GPR152
Gene descriptioni

Full gene name according to HGNC.

G protein-coupled receptor 152
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

G-protein coupled receptors
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

1
HUMAN PROTEIN ATLAS INFORMATIONi

Summary of data presented in the Tissue section, with a representative image of protein expression (left) and an interactive chart showing the tissue-specific mRNA expression (right). The image and the chart are clickable and will redirect to more Tissue data.
This section contains information regarding the expression profiles of protein-coding genes in normal human tissue, both on the mRNA and protein level. The protein expression data is derived from antibody-based protein profiling using immunohistochemistry.

Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Not detected - no cluster assigned
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Not detected
Tau specificity score (RNA)i

Tau specificity score is a numerical indicator of the specificity of the gene expression across cells or tissues. The value ranges from 0 and 1, where 0 indicates identical expression across all cells/tissue types, while 1 indicates expression in a single cell/tissue type.

Not detected
Tissue distribution (RNA)i

The RNA distribution category is based on mRNA expression levels in the analyzed samples based on a combination of data from HPA and GTEX. The categories include: detected in all, detected in many, detected in some, detected in single and not detected.

Not detected
Protein evidencei

Evidence score for genes based on UniProt protein existence (UniProt evidence); neXtProt protein existence (neXtProt evidence);and a Human Protein Atlas antibody- or RNA based score (HPA evidence). The avaliable scores are evidence at protein level, evidence at transcript level, no evidence, or not avaliable.

Read more
Evidence at protein level
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Not available
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.

Not available
INTERACTION SUMMARYi

In the Interaction summary a network plot of the gene's interaction partners is shown with nodes representing genes and edges representing the interaction type and the confidence (MI score) for the interaction. The type of interaction (direct interaction or physical association) is reflected by the colour of the edges, while the confidence of the interaction is reflected by the thickness of the edges. Scores larger than 0.6 (high confidence) have a thicker line than scores between 0.45 and 0.6 (medium confidence).

The highlight bar in the top of the plot can be used to colour the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass.

Nodes can also be highlighted using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Highlight:
Off
Subcell location
Predicted location
Tissue specificity
Protein class

Filter menu »
Fields »
e.g. Brain enriched, Localized to mitochondria

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


Number of interactions: 163 View all protein interaction data in IntAct
Interaction Interaction type Confidence MI score # Interactions
ABCG4 Physical association Medium 0.56 5
ABHD16A Physical association Medium 0.56 46
ACSF2 Physical association Medium 0.56 17
ADIPOQ Physical association Medium 0.56 46
AQP10 Physical association Medium 0.56 17
AQP3 Physical association Medium 0.56 23
AQP6 Physical association Medium 0.56 264
ARL6IP1 Physical association Medium 0.56 60
ARV1 Physical association Medium 0.56 11
ATP6V0C Physical association Medium 0.56 47
B3GNT7 Physical association Medium 0.56 1
BET1 Physical association Medium 0.56 41
BMP10 Physical association Medium 0.56 51
BNIP2 Physical association Medium 0.56 37
BNIP3 Physical association Medium 0.56 49
C14orf180 Physical association Medium 0.56 38
C1QL4 Physical association Medium 0.56 16
C8A Physical association Medium 0.56 6
CCDC167 Physical association Medium 0.56 32
CCL4 Physical association Medium 0.56 16
CCL4L2 Physical association Medium 0.56 31
CD53 Physical association Medium 0.56 57
CD72 Physical association Medium 0.56 13
CD81 Physical association Medium 0.56 22
CDIPT Physical association Medium 0.56 47
CDS2 Physical association Medium 0.56 29
CGRRF1 Physical association Medium 0.56 26
CLDND2 Physical association Medium 0.56 24
CLEC17A Physical association Medium 0.56 19
CLEC1A Physical association Medium 0.56 13
CNIH1 Physical association Medium 0.56 21
COMT Physical association Medium 0.56 53
CSGALNACT2 Physical association Medium 0.56 16
CTXN3 Physical association Medium 0.56 51
CYB561 Physical association Medium 0.56 49
CYB561A3 Physical association Medium 0.56 21
CYB5B Physical association Medium 0.56 37
CYB5R3 Physical association Medium 0.56 50
CYBC1 Physical association Medium 0.56 51
DEFB108B Physical association Medium 0.56 3
DGAT2L6 Physical association Medium 0.56 37
EBP Physical association Medium 0.56 159
EDDM3B Physical association Medium 0.56 17
EFNA5 Physical association Medium 0.56 28
EMD Physical association Medium 0.56 72
ERG28 Physical association Medium 0.56 48
FA2H Physical association Medium 0.56 25
FAM20B Physical association Medium 0.56 8
FAXDC2 Physical association Medium 0.56 28
FDFT1 Physical association Medium 0.56 12
FUNDC2 Physical association Medium 0.56 22
GAST Physical association Medium 0.56 18
GJB2 Physical association Medium 0.56 33
GOLT1A Physical association Medium 0.56 23
GOLT1B Physical association Medium 0.56 8
GOSR2 Physical association Medium 0.56 45
GPR151 Physical association Medium 0.56 35
GPR37L1 Physical association Medium 0.56 49
HHATL Physical association Medium 0.56 13
HMOX1 Physical association Medium 0.56 25
HMOX2 Physical association Medium 0.56 44
IFNA8 Physical association Medium 0.56 1
IGFBP5 Physical association Medium 0.56 63
INSIG2 Physical association Medium 0.56 34
JAGN1 Physical association Medium 0.56 102
KCNA1 Physical association Medium 0.56 13
KCNN4 Physical association Medium 0.56 7
LAMB1 Physical association Medium 0.56 3
LEPROTL1 Physical association Medium 0.56 68
LHFPL2 Physical association Medium 0.56 9
LHFPL5 Physical association Medium 0.56 108
LTC4S Physical association Medium 0.56 8
MAL Physical association Medium 0.56 68
MAL2 Physical association Medium 0.56 37
MFSD5 Physical association Medium 0.56 46
MFSD6 Physical association Medium 0.56 31
MGST3 Physical association Medium 0.56 79
MMD Physical association Medium 0.56 16
MOSPD3 Physical association Medium 0.56 13
MS4A13 Physical association Medium 0.56 52
MYADML2 Physical association Medium 0.56 10
NAT8 Physical association Medium 0.56 25
NDUFB11 Physical association Medium 0.56 9
NEU1 Physical association Medium 0.56 16
NINJ2 Physical association Medium 0.56 63
NIPAL4 Physical association Medium 0.56 15
ORMDL1 Physical association Medium 0.56 31
ORMDL3 Physical association Medium 0.56 23
PEX16 Physical association Medium 0.56 23
PIGF Physical association Medium 0.56 8
PIN1 Physical association Medium 0.56 112
PLN Physical association Medium 0.56 44
PNLIPRP1 Physical association Medium 0.56 31
PRAF2 Physical association Medium 0.56 26
PROM2 Physical association Medium 0.56 2
RABAC1 Physical association Medium 0.56 48
RBFA Physical association Medium 0.56 20
ROBO2 Physical association Medium 0.56 1
RTP2 Physical association Medium 0.56 63
SACM1L Physical association Medium 0.56 26
SCAMP4 Physical association Medium 0.56 16
SCD Physical association Medium 0.56 36
SEC22B Physical association Medium 0.56 45
SERF1A Physical association Medium 0.56 11
SERF1B Physical association Medium 0.56 11
SERP2 Physical association Medium 0.56 42
SFT2D2 Physical association Medium 0.56 24
SFTPC Physical association Medium 0.56 26
SLC10A1 Physical association Medium 0.56 76
SLC13A4 Physical association Medium 0.56 22
SLC30A3 Physical association Medium 0.56 22
SLC35A4 Physical association Medium 0.56 23
SLC35B1 Physical association Medium 0.56 13
SLC35B4 Physical association Medium 0.56 25
SLC35F6 Physical association Medium 0.56 8
SLC38A1 Physical association Medium 0.56 26
SLC38A7 Physical association Medium 0.56 43
SLC39A2 Physical association Medium 0.56 45
SLC41A1 Physical association Medium 0.56 26
SLC66A2 Physical association Medium 0.56 19
SLC7A1 Physical association Medium 0.56 47
SMCO4 Physical association Medium 0.56 51
STATH Physical association Medium 0.56 21
STX1B Physical association Medium 0.56 21
STX3 Physical association Medium 0.56 33
STX4 Physical association Medium 0.56 37
STX5 Physical association Medium 0.56 26
STX8 Physical association Medium 0.56 58
TAP1 Physical association Medium 0.56 17
TEX264 Physical association Medium 0.56 23
TFRC Physical association Medium 0.56 23
THSD7B Physical association Medium 0.56 23
TIMMDC1 Physical association Medium 0.56 53
TM4SF19 Physical association Medium 0.56 32
TMEM100 Physical association Medium 0.56 32
TMEM120B Physical association Medium 0.56 46
TMEM140 Physical association Medium 0.56 44
TMEM14B Physical association Medium 0.56 193
TMEM14C Physical association Medium 0.56 35
TMEM208 Physical association Medium 0.56 18
TMEM218 Physical association Medium 0.56 61
TMEM236 Physical association Medium 0.56 4
TMEM243 Physical association Medium 0.56 37
TMEM254 Physical association Medium 0.56 35
TMEM42 Physical association Medium 0.56 41
TMEM50B Physical association Medium 0.56 18
TMEM54 Physical association Medium 0.56 19
TMEM60 Physical association Medium 0.56 86
TMEM97 Physical association Medium 0.56 49
TMPPE Physical association Medium 0.56 30
TNFRSF10C Physical association Medium 0.56 23
TSPAN33 Physical association Medium 0.56 23
TSPAN7 Physical association Medium 0.56 3
TSPO2 Physical association Medium 0.56 49
UBIAD1 Physical association Medium 0.56 33
UNC50 Physical association Medium 0.56 29
VAMP4 Physical association Medium 0.56 35
VAMP5 Physical association Medium 0.56 58
VKORC1 Physical association Medium 0.56 12
YIPF1 Physical association Medium 0.56 30
YIPF4 Physical association Medium 0.56 28
YIPF6 Physical association Medium 0.56 72
ZDHHC15 Physical association Medium 0.56 47
Show allShow less
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

GPR152 is not a metabolic protein

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by the Knut & Alice Wallenberg Foundation.


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