HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:21.1 nTPM
HPA Brain:19.3 nTPM
GTEx:21.1 nTPM
FANTOM5:38.8 Scaled Tags Per Million
Pig:23.2 nTPM
Mouse:20.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046315
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.3
Sample id Sample description nTPM
Hippocampus
nTPM: 17.6
1911 Female, age 85, right hemisphere 19.8
1898 Male, age 80, left hemisphere 18.0
2148 Female, age 91, left hemisphere 18.0
1855 Male, age 76, left hemisphere 17.5
2621 Female, age 67, right hemisphere 17.0
2529 Female, age 94, left hemisphere 15.4
Dentate gyrus
nTPM: 18.9
1927 Female, age 91, both hemispheres 21.1
2010 Male, age 76, both hemispheres 20.0
2246 Female, age 85, both hemispheres 19.0
2530 Female, age 94, left hemisphere 18.5
2528 Male, age 74, both hemispheres 18.1
2531 Female, age 67, both hemispheres 17.0
Entorhinal gyrus
nTPM: 17.4
2686 Male, age 75, right hemisphere 20.3
1938 Female, age 85, left hemisphere 18.6
2613 Female, age 94, left hemisphere 18.6
1787 Male, age 76, left hemisphere 17.6
2764 Male, age 80, right hemisphere 15.1
2117 Female, age 91, right hemisphere 14.3
Hippocampus, CA1
nTPM: 18.7
2045 Male, age 76, both hemispheres 22.0
2749 Male, age 80, left hemisphere 19.4
2527 Male, age 74, both hemispheres 17.5
1873 Female, age 85, both hemispheres 17.4
2082 Female, age 91, right hemisphere 17.0
Hippocampus, CA2
nTPM: 17.1
2249 Male, age 74, both hemispheres 18.4
2113 Female, age 91, right hemisphere 17.8
1892 Male, age 76, both hemispheres 17.4
1940 Female, age 85, left hemisphere 17.1
2437 Female, age 94, left hemisphere 16.6
1963 Male, age 80, left hemisphere 15.0
Hippocampus, CA3
nTPM: 19.3
2620 Female, age 94, left hemisphere 21.6
1867 Male, age 76, both hemispheres 20.3
2137 Male, age 80, left hemisphere 20.2
1891 Female, age 85, both hemispheres 18.9
2861 Female, age 67, both hemispheres 18.7
2436 Male, age 74, both hemispheres 16.0
Parahippocampal cortex
nTPM: 19.1
2532 Female, age 72, left hemisphere 23.1
1990 Female, age 91, right hemisphere 21.3
2018 Male, age 76, both hemispheres 20.4
2692 Male, age 74, both hemispheres 20.1
2693 Female, age 94, both hemispheres 20.1
1850 Male, age 80, both hemispheres 19.3
1933 Female, age 85, both hemispheres 18.8
2245 Female, age 91, both hemispheres 17.2
2250 Female, age 67, right hemisphere 15.9
2622 Female, age 67, right hemisphere 14.9
Perirhinal gyrus
nTPM: 18.3
1841 Female, age 85, right hemisphere 21.5
2521 Female, age 94, right hemisphere 18.7
2848 Male, age 76, right hemisphere 17.6
1794 Male, age 80, right hemisphere 17.1
1847 Female, age 91, left hemisphere 16.5
Subiculum
nTPM: 17.9
1977 Female, age 85, both hemispheres 20.3
2438 Female, age 94, left hemisphere 19.0
2042 Male, age 76, both hemispheres 18.2
1901 Male, age 80, both hemispheres 17.4
2729 Female, age 91, right hemisphere 16.7
2619 Male, age 74, both hemispheres 15.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.1
Samples: 197

Max nTPM: 51.3
Min nTPM: 7.9
Std nTPM: 5.9
Median nTPM: 20.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 51.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 38.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 36.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 36.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 35.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 33.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 32.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 31.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 31.1
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 31.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 30.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.8
FF:10153-102I9 76 years, female 39.2
FF:10169-103B7 60 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.2
Pig sample Sample description nTPM
Subiculum
nTPM: 21.5
Samples: 4

Max nTPM: 23.6
Min nTPM: 16.1
Sample A Female 16.1
Sample B Female 22.7
Sample C Male 23.4
Sample D Male 23.6
Dorsal hippocampus
nTPM: 22.8
Samples: 4

Max nTPM: 27.0
Min nTPM: 17.5
Sample A Female 17.5
Sample B Female 24.0
Sample C Male 22.5
Sample D Male 27.0
Entorhinal cortex
nTPM: 23.2
Samples: 4

Max nTPM: 25.1
Min nTPM: 22.0
Sample A Female 22.0
Sample B Female 22.3
Sample C Male 23.4
Sample D Male 25.1
Ventral hippocampus
nTPM: 22.7
Samples: 4

Max nTPM: 26.3
Min nTPM: 19.4
Sample A Female 22.9
Sample B Female 26.3
Sample C Male 19.4
Sample D Male 22.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 22.2
Min nTPM: 12.2
Sample A Male 22.2
Sample B Male 16.8
Sample C Female 12.2
Sample D Female 15.9
Hippocampal formation
nTPM: 20.1
Samples: 4

Max nTPM: 23.2
Min nTPM: 17.9
Sample A Male 17.9
Sample B Male 18.8
Sample C Female 23.2
Sample D Female 20.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
70305389 Antisense, RP_050609_04_A12, Mouse strain C57BL/6J (56 days, male) 0.5

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