HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:417.7 nTPM
HPA Brain:289.0 nTPM
GTEx:417.7 nTPM
FANTOM5:272.0 Scaled Tags Per Million
Pig:645.6 nTPM
Mouse:983.5 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055942
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 289.0
Sample id Sample description nTPM
Hippocampus
nTPM: 259.2
1898 Male, age 80, left hemisphere 349.0
2529 Female, age 94, left hemisphere 268.6
2148 Female, age 91, left hemisphere 238.8
1911 Female, age 85, right hemisphere 238.1
1855 Male, age 76, left hemisphere 236.4
2621 Female, age 67, right hemisphere 224.1
Dentate gyrus
nTPM: 240.9
2010 Male, age 76, both hemispheres 285.3
1927 Female, age 91, both hemispheres 279.2
2530 Female, age 94, left hemisphere 245.0
2528 Male, age 74, both hemispheres 243.9
2246 Female, age 85, both hemispheres 217.2
2531 Female, age 67, both hemispheres 175.0
Entorhinal gyrus
nTPM: 246.0
1787 Male, age 76, left hemisphere 268.1
2117 Female, age 91, right hemisphere 267.0
2764 Male, age 80, right hemisphere 261.5
1938 Female, age 85, left hemisphere 257.1
2686 Male, age 75, right hemisphere 225.9
2613 Female, age 94, left hemisphere 196.2
Hippocampus, CA1
nTPM: 289.0
2749 Male, age 80, left hemisphere 433.5
1873 Female, age 85, both hemispheres 267.5
2527 Male, age 74, both hemispheres 257.0
2045 Male, age 76, both hemispheres 251.3
2082 Female, age 91, right hemisphere 235.8
Hippocampus, CA2
nTPM: 269.1
1963 Male, age 80, left hemisphere 362.0
2249 Male, age 74, both hemispheres 307.6
1892 Male, age 76, both hemispheres 292.9
2437 Female, age 94, left hemisphere 233.5
2113 Female, age 91, right hemisphere 210.6
1940 Female, age 85, left hemisphere 208.0
Hippocampus, CA3
nTPM: 268.8
2436 Male, age 74, both hemispheres 315.4
2137 Male, age 80, left hemisphere 304.1
1867 Male, age 76, both hemispheres 288.9
2620 Female, age 94, left hemisphere 257.9
1891 Female, age 85, both hemispheres 236.3
2861 Female, age 67, both hemispheres 210.1
Parahippocampal cortex
nTPM: 232.2
2250 Female, age 67, right hemisphere 286.7
1850 Male, age 80, both hemispheres 268.2
2018 Male, age 76, both hemispheres 263.6
1990 Female, age 91, right hemisphere 245.2
1933 Female, age 85, both hemispheres 231.9
2245 Female, age 91, both hemispheres 223.8
2692 Male, age 74, both hemispheres 217.8
2622 Female, age 67, right hemisphere 198.5
2693 Female, age 94, both hemispheres 197.7
2532 Female, age 72, left hemisphere 188.4
Perirhinal gyrus
nTPM: 266.5
1794 Male, age 80, right hemisphere 331.1
1847 Female, age 91, left hemisphere 309.1
1841 Female, age 85, right hemisphere 248.4
2521 Female, age 94, right hemisphere 226.3
2848 Male, age 76, right hemisphere 217.4
Subiculum
nTPM: 235.7
1977 Female, age 85, both hemispheres 277.7
1901 Male, age 80, both hemispheres 268.6
2619 Male, age 74, both hemispheres 256.7
2729 Female, age 91, right hemisphere 236.7
2042 Male, age 76, both hemispheres 216.6
2438 Female, age 94, left hemisphere 158.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 417.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 417.7
Samples: 197

Max nTPM: 996.7
Min nTPM: 142.5
Std nTPM: 127.2
Median nTPM: 401.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 996.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 957.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 904.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 819.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 783.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 744.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 740.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 714.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 712.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 655.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 649.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 272.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 272.0
FF:10169-103B7 60 years, female 327.1
FF:10153-102I9 76 years, female 216.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 645.6
Pig sample Sample description nTPM
Subiculum
nTPM: 511.2
Samples: 4

Max nTPM: 719.1
Min nTPM: 404.8
Sample A Female 719.1
Sample B Female 470.0
Sample C Male 404.8
Sample D Male 450.8
Dorsal hippocampus
nTPM: 645.6
Samples: 4

Max nTPM: 934.6
Min nTPM: 468.5
Sample A Female 934.6
Sample B Female 589.0
Sample C Male 590.2
Sample D Male 468.5
Entorhinal cortex
nTPM: 573.7
Samples: 4

Max nTPM: 660.6
Min nTPM: 432.6
Sample A Female 590.7
Sample B Female 660.6
Sample C Male 610.8
Sample D Male 432.6
Ventral hippocampus
nTPM: 575.8
Samples: 4

Max nTPM: 667.3
Min nTPM: 418.2
Sample A Female 646.4
Sample B Female 418.2
Sample C Male 667.3
Sample D Male 571.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 983.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 943.4
Samples: 4

Max nTPM: 979.9
Min nTPM: 886.4
Sample A Male 943.0
Sample B Male 979.9
Sample C Female 964.4
Sample D Female 886.4
Hippocampal formation
nTPM: 983.5
Samples: 4

Max nTPM: 1071.5
Min nTPM: 918.8
Sample A Male 1016.1
Sample B Male 927.6
Sample C Female 918.8
Sample D Female 1071.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
69568986 Antisense, RP_050426_03_C02, Mouse strain C57BL/6J (56 days, male) 7.9

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