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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
295.5
nTPM
FANTOM5:
164.2
Scaled Tags Per Million
Pig:
68.9
nTPM
Allen mouse:
2.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
295.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 260.2
2090
Male, age 80, both hemispheres
341.1
2188
Female, age 91, both hemispheres
302.3
2301
Female, age 85, both hemispheres
259.5
1984
Male, age 76, both hemispheres
137.9
Dorsal cochlear nucleus nTPM: 243.3
2378
Male, age 80, both hemispheres
263.8
2802
Male, age 74, right hemisphere
260.2
2187
Female, age 91, both hemispheres
255.2
2370
Male, age 61, both hemispheres
236.3
2058
Male, age 76, both hemispheres
201.0
Dorsal tegmental nucleus nTPM: 214.4
2083
Male, age 80, both hemispheres
270.8
2326
Male, age 74, both hemispheres
249.5
1936
Male, age 76, left hemisphere
197.3
2358
Male, age 61, both hemispheres
140.0
Dorsolateral tegmental area nTPM: 229.5
2751
Female, age 85, both hemispheres
306.9
2654
Male, age 80, both hemispheres
273.7
2337
Male, age 61, both hemispheres
231.3
2360
Male, age 74, both hemispheres
190.7
2141
Male, age 76, both hemispheres
144.7
Kolliker-Fuse nucleus nTPM: 239.5
2793
Female, age 91, left hemisphere
303.2
2163
Male, age 80, both hemispheres
223.8
2315
Male, age 76, right hemisphere
191.5
Lateral lemniscal nuclei nTPM: 213.0
2320
Female, age 91, left hemisphere
255.8
2746
Female, age 85, left hemisphere
241.2
2453
Male, age 74, right hemisphere
197.3
2036
Male, age 80, both hemispheres
194.1
2169
Male, age 76, both hemispheres
176.3
Lateral parabrachial nucleus nTPM: 268.5
2792
Male, age 76, both hemispheres
368.0
2013
Male, age 80, both hemispheres
307.0
2790
Male, age 61, both hemispheres
209.9
2139
Female, age 85, right hemisphere
189.1
Lateral vestibular nucleus nTPM: 236.7
2311
Male, age 80, both hemispheres
254.1
2184
Male, age 76, both hemispheres
219.3
Locus coeruleus nTPM: 156.6
2720
Male, age 74, both hemispheres
179.3
2162
Male, age 80, both hemispheres
174.7
2317
Female, age 72, unknown
168.7
2014
Male, age 55, unknown
162.8
2788
Male, age 74, unknown
145.8
2123
Female, age 91, both hemispheres
138.6
1980
Male, age 76, both hemispheres
126.3
Medial parabrachial nucleus nTPM: 240.4
2170
Female, age 91, both hemispheres
273.1
2463
Female, age 85, right hemisphere
254.7
2854
Male, age 80, both hemispheres
232.8
2786
Male, age 76, both hemispheres
229.4
2156
Male, age 61, both hemispheres
211.7
Medial periolivary nuclei nTPM: 223.3
2081
Male, age 80, both hemispheres
317.7
2458
Female, age 91, both hemispheres
240.4
2791
Male, age 74, right hemisphere
224.8
2063
Male, age 76, both hemispheres
193.0
2171
Female, age 85, both hemispheres
140.6
Motor facial nucleus nTPM: 220.7
2126
Male, age 61, both hemispheres
307.8
2697
Female, age 85, both hemispheres
237.3
2365
Male, age 74, right hemisphere
229.5
2327
Male, age 80, both hemispheres
189.2
2795
Female, age 91, both hemispheres
188.8
2062
Male, age 76, both hemispheres
171.2
Motor trigeminal nucleus nTPM: 239.5
2321
Female, age 91, both hemispheres
257.3
2560
Male, age 74, both hemispheres
247.2
2309
Male, age 76, both hemispheres
245.2
2079
Male, age 80, both hemispheres
225.3
2335
Male, age 61, both hemispheres
222.7
Nuclei of the trapezoid body nTPM: 197.5
2166
Male, age 80, both hemispheres
268.4
2159
Male, age 61, both hemispheres
207.3
2368
Female, age 91, both hemispheres
198.7
1983
Male, age 76, both hemispheres
183.8
2735
Female, age 85, both hemispheres
129.4
Nucleus raphe magnus nTPM: 189.5
2051
Male, age 76, both hemispheres
230.4
2459
Female, age 91, both hemispheres
224.9
2328
Male, age 80, both hemispheres
224.0
2455
Male, age 74, both hemispheres
184.0
2160
Male, age 61, both hemispheres
154.3
2172
Female, age 85, both hemispheres
119.2
Paramedian reticular nucleus nTPM: 242.9
2057
Male, age 80, both hemispheres
283.3
2052
Male, age 76, both hemispheres
266.3
2313
Male, age 61, both hemispheres
215.2
2050
Female, age 85, both hemispheres
206.8
Pedunculopontine tegmental nucleus nTPM: 200.0
2334
Male, age 80, both hemispheres
235.2
1921
Female, age 85, both hemispheres
184.6
2338
Male, age 61, both hemispheres
180.1
Pontine nuclei nTPM: 243.6
2115
Male, age 80, left hemisphere
308.4
2319
Female, age 91, both hemispheres
303.0
2454
Male, age 74, left hemisphere
299.7
2109
Female, age 72, unknown
245.0
1968
Male, age 76, left hemisphere
236.3
2727
Male, age 61, right hemisphere
205.4
1863
Male, age 55, unknown
196.9
2787
Female, age 85, both hemispheres
154.2
Pontine raphe nucleus nTPM: 182.0
2853
Male, age 76, midline
190.5
2122
Female, age 85, midline
173.5
Posteroventral cochlear nucleus nTPM: 295.5
2135
Female, age 91, both hemispheres
383.0
2341
Male, age 80, both hemispheres
359.3
2371
Male, age 61, both hemispheres
282.4
2070
Male, age 76, both hemispheres
276.1
2752
Female, age 85, both hemispheres
176.7
Principal sensory trigeminal nucleus nTPM: 217.1
2367
Female, age 91, left hemisphere
274.8
2324
Male, age 76, both hemispheres
201.3
2008
Male, age 80, left hemisphere
198.4
2158
Male, age 61, both hemispheres
193.8
Reticular pontine nucleus, caudal nTPM: 255.5
2559
Male, age 74, both hemispheres
304.1
2092
Male, age 76, both hemispheres
261.7
2457
Female, age 91, both hemispheres
258.8
2332
Male, age 80, right hemisphere
197.4
Reticular pontine nucleus, oral nTPM: 265.7
2366
Female, age 91, both hemispheres
312.9
2361
Male, age 74, both hemispheres
282.0
1939
Male, age 80, both hemispheres
268.2
2167
Male, age 76, both hemispheres
239.1
2012
Female, age 85, both hemispheres
226.5
Reticulotegmental nucleus nTPM: 209.6
2452
Male, age 74, both hemispheres
244.8
2333
Male, age 80, both hemispheres
226.6
2322
Female, age 91, both hemispheres
209.2
2325
Male, age 76, both hemispheres
157.8
Spinal trigeminal nucleus, oral nTPM: 206.2
2164
Male, age 80, both hemispheres
229.5
1978
Male, age 76, both hemispheres
217.7
2737
Female, age 85, both hemispheres
171.5
Subcoeruleus area nTPM: 240.1
2369
Female, age 85, left hemisphere
359.2
2451
Male, age 74, both hemispheres
237.9
2089
Male, age 76, left hemisphere
227.1
1958
Male, age 80, both hemispheres
217.1
2323
Female, age 91, left hemisphere
159.5
Superior olive nTPM: 238.3
2020
Male, age 76, both hemispheres
295.4
2329
Male, age 80, right hemisphere
256.3
2364
Male, age 74, right hemisphere
233.8
2561
Female, age 91, both hemispheres
214.6
1875
Female, age 85, both hemispheres
191.3
Ventral periolivary nuclei nTPM: 215.3
2023
Male, age 76, both hemispheres
312.5
2165
Male, age 80, both hemispheres
207.7
2794
Female, age 91, left hemisphere
197.5
2130
Female, age 85, both hemispheres
143.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 226.7
2456
Female, age 91, both hemispheres
248.7
1959
Male, age 76, both hemispheres
241.6
2161
Male, age 80, both hemispheres
236.8
2840
Female, age 85, both hemispheres
225.2
2359
Male, age 61, both hemispheres
213.9
2449
Male, age 74, both hemispheres
193.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
68.9
Pig sample
Sample description
nTPM
Pons nTPM: 68.9
Samples: 4
Max nTPM: 85.1
Min nTPM: 58.7
Sample A
Female
58.7
Sample B
Female
60.0
Sample C
Male
71.9
Sample D
Male
85.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
