HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:107.4 nTPM
HPA Brain:177.4 nTPM
GTEx:107.4 nTPM
FANTOM5:119.3 Scaled Tags Per Million
Pig:209.8 nTPM
Mouse:263.4 nTPM
Allen mouse:8.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052606
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 177.4
Sample id Sample description nTPM
Hippocampus
nTPM: 165.7
1898 Male, age 80, left hemisphere 198.3
1855 Male, age 76, left hemisphere 195.6
2621 Female, age 67, right hemisphere 179.7
2148 Female, age 91, left hemisphere 162.4
2529 Female, age 94, left hemisphere 133.4
1911 Female, age 85, right hemisphere 124.8
Dentate gyrus
nTPM: 161.3
2530 Female, age 94, left hemisphere 210.6
2010 Male, age 76, both hemispheres 189.0
1927 Female, age 91, both hemispheres 174.8
2246 Female, age 85, both hemispheres 145.4
2531 Female, age 67, both hemispheres 131.1
2528 Male, age 74, both hemispheres 116.7
Entorhinal gyrus
nTPM: 155.6
1787 Male, age 76, left hemisphere 179.3
2613 Female, age 94, left hemisphere 177.6
2764 Male, age 80, right hemisphere 169.8
1938 Female, age 85, left hemisphere 156.2
2686 Male, age 75, right hemisphere 143.3
2117 Female, age 91, right hemisphere 107.5
Hippocampus, CA1
nTPM: 168.8
2749 Male, age 80, left hemisphere 298.6
1873 Female, age 85, both hemispheres 194.2
2527 Male, age 74, both hemispheres 139.9
2045 Male, age 76, both hemispheres 115.4
2082 Female, age 91, right hemisphere 96.1
Hippocampus, CA2
nTPM: 172.1
1963 Male, age 80, left hemisphere 288.3
1892 Male, age 76, both hemispheres 248.4
2437 Female, age 94, left hemisphere 155.7
1940 Female, age 85, left hemisphere 131.1
2249 Male, age 74, both hemispheres 105.9
2113 Female, age 91, right hemisphere 103.4
Hippocampus, CA3
nTPM: 154.5
2861 Female, age 67, both hemispheres 203.6
2137 Male, age 80, left hemisphere 186.1
1867 Male, age 76, both hemispheres 174.6
2620 Female, age 94, left hemisphere 132.7
1891 Female, age 85, both hemispheres 122.5
2436 Male, age 74, both hemispheres 107.2
Parahippocampal cortex
nTPM: 157.9
2532 Female, age 72, left hemisphere 201.3
1850 Male, age 80, both hemispheres 192.0
2622 Female, age 67, right hemisphere 175.0
1933 Female, age 85, both hemispheres 164.4
2245 Female, age 91, both hemispheres 153.7
2250 Female, age 67, right hemisphere 146.3
2692 Male, age 74, both hemispheres 142.9
2693 Female, age 94, both hemispheres 139.6
1990 Female, age 91, right hemisphere 133.8
2018 Male, age 76, both hemispheres 130.5
Perirhinal gyrus
nTPM: 177.4
1794 Male, age 80, right hemisphere 190.1
1847 Female, age 91, left hemisphere 188.9
1841 Female, age 85, right hemisphere 173.0
2521 Female, age 94, right hemisphere 171.9
2848 Male, age 76, right hemisphere 162.9
Subiculum
nTPM: 127.6
2438 Female, age 94, left hemisphere 139.4
1901 Male, age 80, both hemispheres 138.4
1977 Female, age 85, both hemispheres 131.7
2619 Male, age 74, both hemispheres 129.4
2729 Female, age 91, right hemisphere 115.4
2042 Male, age 76, both hemispheres 111.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 107.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 107.4
Samples: 197

Max nTPM: 289.6
Min nTPM: 21.4
Std nTPM: 43.2
Median nTPM: 99.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 289.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 251.2
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 232.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 224.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 201.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 200.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 197.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 194.9
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 193.2
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 192.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 187.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 119.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 119.3
FF:10169-103B7 60 years, female 127.7
FF:10153-102I9 76 years, female 111.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 209.8
Pig sample Sample description nTPM
Subiculum
nTPM: 162.2
Samples: 4

Max nTPM: 212.8
Min nTPM: 137.8
Sample A Female 212.8
Sample B Female 158.0
Sample C Male 137.8
Sample D Male 140.1
Dorsal hippocampus
nTPM: 133.6
Samples: 4

Max nTPM: 163.4
Min nTPM: 90.3
Sample A Female 163.4
Sample B Female 126.8
Sample C Male 154.0
Sample D Male 90.3
Entorhinal cortex
nTPM: 209.8
Samples: 4

Max nTPM: 247.4
Min nTPM: 179.7
Sample A Female 190.7
Sample B Female 221.2
Sample C Male 247.4
Sample D Male 179.7
Ventral hippocampus
nTPM: 123.2
Samples: 4

Max nTPM: 138.3
Min nTPM: 105.6
Sample A Female 117.3
Sample B Female 105.6
Sample C Male 138.3
Sample D Male 131.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 263.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 263.4
Samples: 4

Max nTPM: 281.8
Min nTPM: 253.9
Sample A Male 253.9
Sample B Male 255.9
Sample C Female 261.8
Sample D Female 281.8
Hippocampal formation
nTPM: 246.1
Samples: 4

Max nTPM: 262.4
Min nTPM: 231.5
Sample A Male 262.4
Sample B Male 237.3
Sample C Female 253.0
Sample D Female 231.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.2
71764320 Antisense, RP_050921_03_E08, Mouse strain C57BL/6J (56 days, male) 8.2

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