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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
56.7
nTPM
Monaco:
234.3
nTPM
Schmiedel:
191.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.7
HPA sample
nTPM
gdT-cell nTPM: 52.5
Samples: 6
Max nTPM: 63.2
Min nTPM: 46.5
P10809_1007
47.2
P10809_1022
52.9
P10809_1041
51.5
P10809_1060
46.5
P10809_1077
53.4
P10809_1098
63.2
MAIT T-cell nTPM: 45.1
Samples: 6
Max nTPM: 58.0
Min nTPM: 36.4
P10809_1006
58.0
P10809_1024
36.4
P10809_1043
42.1
P10809_1062
44.0
P10809_1083
40.7
P10809_1097
49.2
Memory CD4 T-cell nTPM: 48.1
Samples: 6
Max nTPM: 58.1
Min nTPM: 39.1
P10809_1014
51.3
P10809_1026
47.7
P10809_1045
47.6
P10809_1064
39.1
P10809_1086
44.7
P10809_1113
58.1
Memory CD8 T-cell nTPM: 52.2
Samples: 5
Max nTPM: 63.5
Min nTPM: 45.9
P10809_1012
63.5
P10809_1027
53.6
P10809_1046
45.9
P10809_1065
46.3
P10809_1111
51.8
Naive CD4 T-cell nTPM: 46.9
Samples: 6
Max nTPM: 58.3
Min nTPM: 28.7
P10809_1015
54.5
P10809_1030
43.4
P10809_1049
28.7
P10809_1068
56.6
P10809_1085
39.9
P10809_1112
58.3
Naive CD8 T-cell nTPM: 47.9
Samples: 6
Max nTPM: 52.8
Min nTPM: 43.8
P10809_1016
52.8
P10809_1031
51.4
P10809_1050
44.7
P10809_1069
43.8
P10809_1087
49.3
P10809_1110
45.4
T-reg nTPM: 56.7
Samples: 6
Max nTPM: 67.4
Min nTPM: 43.8
P10809_1018
67.4
P10809_1037
43.8
P10809_1056
46.0
P10809_1075
56.3
P10809_1094
67.1
P10809_1106
59.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
234.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 231.6
Samples: 4
Max nTPM: 271.7
Min nTPM: 200.9
RHH5202_R3573
243.3
RHH5230_R3602
200.9
RHH5259_R3631
210.4
RHH5288_R3660
271.7
Effector memory CD8 T-cell nTPM: 229.6
Samples: 4
Max nTPM: 243.1
Min nTPM: 213.9
RHH5203_R3574
243.1
RHH5231_R3603
213.9
RHH5260_R3632
239.2
RHH5289_R3661
222.2
MAIT T-cell nTPM: 183.8
Samples: 4
Max nTPM: 198.4
Min nTPM: 171.7
RHH5233_R3605
198.4
RHH5205_R3576
171.7
RHH5262_R3634
175.2
RHH5297_R3663
189.8
Memory CD4 T-cell TFH nTPM: 209.8
Samples: 4
Max nTPM: 219.4
Min nTPM: 192.6
RHH5300_R3666
213.5
RHH5236_R3608
192.6
RHH5265_R3637
219.4
RHH5208_R3579
213.6
Memory CD4 T-cell Th1 nTPM: 224.6
Samples: 4
Max nTPM: 248.7
Min nTPM: 203.5
RHH5210_R3581
213.8
RHH5302_R3668
248.7
RHH5238_R3610
232.3
RHH5267_R3639
203.5
Memory CD4 T-cell Th1/Th17 nTPM: 211.8
Samples: 4
Max nTPM: 232.3
Min nTPM: 178.5
RHH5303_R3669
232.3
RHH5211_R3582
220.8
RHH5239_R3611
215.7
RHH5268_R3640
178.5
Memory CD4 T-cell Th17 nTPM: 222.7
Samples: 4
Max nTPM: 295.3
Min nTPM: 182.7
RHH5304_R3670
212.6
RHH5212_R3583
200.2
RHH5240_R3612
295.3
RHH5269_R3641
182.7
Memory CD4 T-cell Th2 nTPM: 234.3
Samples: 4
Max nTPM: 246.6
Min nTPM: 212.1
RHH5305_R3671
246.6
RHH5213_R3584
212.1
RHH5241_R3613
245.0
RHH5270_R3642
233.4
Naive CD4 T-cell nTPM: 207.5
Samples: 4
Max nTPM: 214.7
Min nTPM: 203.6
RHH5306_R3672
206.7
RHH5214_R3585
205.0
RHH5242_R3614
214.7
RHH5271_R3643
203.6
Naive CD8 T-cell nTPM: 214.0
Samples: 4
Max nTPM: 236.2
Min nTPM: 169.9
RHH5201_R3572
169.9
RHH5229_R3601
228.0
RHH5258_R3630
236.2
RHH5287_R3659
221.8
Non-Vd2 gdTCR nTPM: 215.4
Samples: 4
Max nTPM: 237.4
Min nTPM: 196.9
RHH5235_R3607
196.9
RHH5264_R3636
229.2
RHH5207_R3578
237.4
RHH5299_R3665
197.9
T-reg nTPM: 198.0
Samples: 4
Max nTPM: 218.8
Min nTPM: 174.4
RHH5301_R3667
218.8
RHH5237_R3609
205.3
RHH5266_R3638
174.4
RHH5209_R3580
193.5
Terminal effector memory CD4 T-cell nTPM: 208.0
Samples: 2
Max nTPM: 221.2
Min nTPM: 194.7
RHH5243_R3615
194.7
RHH5272_R3644
221.2
Terminal effector memory CD8 T-cell nTPM: 232.4
Samples: 4
Max nTPM: 245.5
Min nTPM: 216.7
RHH5232_R3604
244.7
RHH5204_R3575
222.6
RHH5261_R3633
216.7
RHH5296_R3662
245.5
Vd2 gdTCR nTPM: 197.9
Samples: 4
Max nTPM: 227.1
Min nTPM: 166.9
RHH5234_R3606
166.9
RHH5206_R3577
227.1
RHH5263_R3635
199.7
RHH5298_R3664
197.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
