HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:29.4 nTPM
HPA Brain:159.7 nTPM
GTEx:29.4 nTPM
FANTOM5:101.9 Scaled Tags Per Million
Pig:55.8 nTPM
Mouse:9.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA025967Antibody HPA029906Antibody CAB003847
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 159.7
Sample id Sample description nTPM
Hippocampus
nTPM: 158.6
2529 Female, age 94, left hemisphere 208.1
2148 Female, age 91, left hemisphere 181.2
1898 Male, age 80, left hemisphere 151.0
1911 Female, age 85, right hemisphere 144.9
1855 Male, age 76, left hemisphere 136.0
2621 Female, age 67, right hemisphere 130.4
Dentate gyrus
nTPM: 159.7
2528 Male, age 74, both hemispheres 230.3
2530 Female, age 94, left hemisphere 180.0
2531 Female, age 67, both hemispheres 162.3
2246 Female, age 85, both hemispheres 141.0
2010 Male, age 76, both hemispheres 128.4
1927 Female, age 91, both hemispheres 116.2
Entorhinal gyrus
nTPM: 145.9
2117 Female, age 91, right hemisphere 204.6
1787 Male, age 76, left hemisphere 147.2
2686 Male, age 75, right hemisphere 145.5
2764 Male, age 80, right hemisphere 139.3
2613 Female, age 94, left hemisphere 129.1
1938 Female, age 85, left hemisphere 109.6
Hippocampus, CA1
nTPM: 142.3
2527 Male, age 74, both hemispheres 178.4
2082 Female, age 91, right hemisphere 158.1
1873 Female, age 85, both hemispheres 153.2
2045 Male, age 76, both hemispheres 114.1
2749 Male, age 80, left hemisphere 107.8
Hippocampus, CA2
nTPM: 145.0
2113 Female, age 91, right hemisphere 166.7
2437 Female, age 94, left hemisphere 159.6
2249 Male, age 74, both hemispheres 153.3
1963 Male, age 80, left hemisphere 150.7
1940 Female, age 85, left hemisphere 142.5
1892 Male, age 76, both hemispheres 96.9
Hippocampus, CA3
nTPM: 145.9
2861 Female, age 67, both hemispheres 205.2
2620 Female, age 94, left hemisphere 180.8
1891 Female, age 85, both hemispheres 134.6
2436 Male, age 74, both hemispheres 132.8
2137 Male, age 80, left hemisphere 114.5
1867 Male, age 76, both hemispheres 107.6
Parahippocampal cortex
nTPM: 121.8
2622 Female, age 67, right hemisphere 148.0
2692 Male, age 74, both hemispheres 141.0
2245 Female, age 91, both hemispheres 140.6
1990 Female, age 91, right hemisphere 132.2
2250 Female, age 67, right hemisphere 123.9
2018 Male, age 76, both hemispheres 121.0
2532 Female, age 72, left hemisphere 107.5
1933 Female, age 85, both hemispheres 106.7
1850 Male, age 80, both hemispheres 100.6
2693 Female, age 94, both hemispheres 96.0
Perirhinal gyrus
nTPM: 106.4
2521 Female, age 94, right hemisphere 120.1
1794 Male, age 80, right hemisphere 113.2
1847 Female, age 91, left hemisphere 105.5
1841 Female, age 85, right hemisphere 96.7
2848 Male, age 76, right hemisphere 96.2
Subiculum
nTPM: 145.1
2729 Female, age 91, right hemisphere 198.0
2619 Male, age 74, both hemispheres 177.7
2438 Female, age 94, left hemisphere 132.7
1977 Female, age 85, both hemispheres 126.1
2042 Male, age 76, both hemispheres 119.4
1901 Male, age 80, both hemispheres 116.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.4
Samples: 197

Max nTPM: 73.4
Min nTPM: 12.2
Std nTPM: 9.4
Median nTPM: 28.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 73.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 58.8
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 56.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 53.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 52.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 49.9
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 47.7
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 46.3
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 46.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 46.3
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 46.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 101.9
FF:10153-102I9 76 years, female 126.9
FF:10169-103B7 60 years, female 76.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.8
Pig sample Sample description nTPM
Subiculum
nTPM: 55.8
Samples: 4

Max nTPM: 68.4
Min nTPM: 43.3
Sample A Female 68.4
Sample B Female 43.3
Sample C Male 62.1
Sample D Male 49.2
Dorsal hippocampus
nTPM: 45.2
Samples: 4

Max nTPM: 51.3
Min nTPM: 33.8
Sample A Female 51.3
Sample B Female 45.5
Sample C Male 50.3
Sample D Male 33.8
Entorhinal cortex
nTPM: 55.7
Samples: 4

Max nTPM: 68.1
Min nTPM: 46.9
Sample A Female 68.1
Sample B Female 46.9
Sample C Male 60.5
Sample D Male 47.2
Ventral hippocampus
nTPM: 55.2
Samples: 4

Max nTPM: 81.0
Min nTPM: 38.9
Sample A Female 50.6
Sample B Female 38.9
Sample C Male 81.0
Sample D Male 50.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 11.6
Min nTPM: 7.7
Sample A Male 10.2
Sample B Male 9.7
Sample C Female 7.7
Sample D Female 11.6
Hippocampal formation
nTPM: 7.0
Samples: 4

Max nTPM: 8.7
Min nTPM: 4.7
Sample A Male 4.7
Sample B Male 8.7
Sample C Female 8.1
Sample D Female 6.3

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