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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
151.7
nTPM
FANTOM5:
73.2
Scaled Tags Per Million
Pig:
47.9
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
151.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 113.9
1984
Male, age 76, both hemispheres
129.0
2090
Male, age 80, both hemispheres
126.3
2301
Female, age 85, both hemispheres
112.2
2188
Female, age 91, both hemispheres
87.9
Dorsal cochlear nucleus nTPM: 111.5
2370
Male, age 61, both hemispheres
127.7
2378
Male, age 80, both hemispheres
119.1
2058
Male, age 76, both hemispheres
113.3
2187
Female, age 91, both hemispheres
100.8
2802
Male, age 74, right hemisphere
96.8
Dorsal tegmental nucleus nTPM: 115.2
2358
Male, age 61, both hemispheres
135.0
1936
Male, age 76, left hemisphere
124.7
2083
Male, age 80, both hemispheres
101.8
2326
Male, age 74, both hemispheres
99.2
Dorsolateral tegmental area nTPM: 106.6
2337
Male, age 61, both hemispheres
144.3
2360
Male, age 74, both hemispheres
111.4
2141
Male, age 76, both hemispheres
106.8
2654
Male, age 80, both hemispheres
95.0
2751
Female, age 85, both hemispheres
75.8
Kolliker-Fuse nucleus nTPM: 134.6
2315
Male, age 76, right hemisphere
181.4
2163
Male, age 80, both hemispheres
134.3
2793
Female, age 91, left hemisphere
87.9
Lateral lemniscal nuclei nTPM: 109.9
2169
Male, age 76, both hemispheres
126.6
2746
Female, age 85, left hemisphere
121.6
2453
Male, age 74, right hemisphere
121.1
2320
Female, age 91, left hemisphere
101.3
2036
Male, age 80, both hemispheres
79.2
Lateral parabrachial nucleus nTPM: 118.6
2139
Female, age 85, right hemisphere
151.1
2792
Male, age 76, both hemispheres
114.1
2013
Male, age 80, both hemispheres
113.0
2790
Male, age 61, both hemispheres
96.2
Lateral vestibular nucleus nTPM: 151.7
2184
Male, age 76, both hemispheres
174.7
2311
Male, age 80, both hemispheres
128.7
Locus coeruleus nTPM: 106.9
1980
Male, age 76, both hemispheres
130.0
2317
Female, age 72, unknown
123.4
2123
Female, age 91, both hemispheres
122.5
2014
Male, age 55, unknown
101.6
2162
Male, age 80, both hemispheres
100.0
2788
Male, age 74, unknown
87.0
2720
Male, age 74, both hemispheres
83.6
Medial parabrachial nucleus nTPM: 103.4
2156
Male, age 61, both hemispheres
133.0
2786
Male, age 76, both hemispheres
117.2
2463
Female, age 85, right hemisphere
90.4
2854
Male, age 80, both hemispheres
89.0
2170
Female, age 91, both hemispheres
87.3
Medial periolivary nuclei nTPM: 119.9
2171
Female, age 85, both hemispheres
139.3
2063
Male, age 76, both hemispheres
128.4
2081
Male, age 80, both hemispheres
119.4
2791
Male, age 74, right hemisphere
114.5
2458
Female, age 91, both hemispheres
97.8
Motor facial nucleus nTPM: 121.5
2062
Male, age 76, both hemispheres
141.1
2795
Female, age 91, both hemispheres
132.1
2327
Male, age 80, both hemispheres
128.2
2126
Male, age 61, both hemispheres
119.9
2365
Male, age 74, right hemisphere
113.4
2697
Female, age 85, both hemispheres
94.5
Motor trigeminal nucleus nTPM: 113.7
2335
Male, age 61, both hemispheres
139.8
2079
Male, age 80, both hemispheres
122.3
2309
Male, age 76, both hemispheres
109.0
2560
Male, age 74, both hemispheres
102.4
2321
Female, age 91, both hemispheres
94.8
Nuclei of the trapezoid body nTPM: 128.6
2735
Female, age 85, both hemispheres
145.0
1983
Male, age 76, both hemispheres
135.8
2368
Female, age 91, both hemispheres
124.6
2159
Male, age 61, both hemispheres
122.1
2166
Male, age 80, both hemispheres
115.7
Nucleus raphe magnus nTPM: 121.9
2172
Female, age 85, both hemispheres
136.3
2455
Male, age 74, both hemispheres
135.7
2051
Male, age 76, both hemispheres
129.7
2328
Male, age 80, both hemispheres
124.5
2160
Male, age 61, both hemispheres
108.7
2459
Female, age 91, both hemispheres
96.8
Paramedian reticular nucleus nTPM: 96.9
2313
Male, age 61, both hemispheres
120.4
2057
Male, age 80, both hemispheres
108.4
2050
Female, age 85, both hemispheres
85.6
2052
Male, age 76, both hemispheres
73.3
Pedunculopontine tegmental nucleus nTPM: 93.8
2338
Male, age 61, both hemispheres
104.1
2334
Male, age 80, both hemispheres
92.4
1921
Female, age 85, both hemispheres
84.9
Pontine nuclei nTPM: 110.2
1968
Male, age 76, left hemisphere
141.8
2787
Female, age 85, both hemispheres
136.1
2115
Male, age 80, left hemisphere
135.7
1863
Male, age 55, unknown
121.9
2109
Female, age 72, unknown
117.9
2319
Female, age 91, both hemispheres
81.4
2727
Male, age 61, right hemisphere
79.8
2454
Male, age 74, left hemisphere
66.9
Pontine raphe nucleus nTPM: 98.3
2122
Female, age 85, midline
103.2
2853
Male, age 76, midline
93.4
Posteroventral cochlear nucleus nTPM: 97.3
2371
Male, age 61, both hemispheres
113.2
2341
Male, age 80, both hemispheres
106.1
2752
Female, age 85, both hemispheres
96.1
2070
Male, age 76, both hemispheres
94.8
2135
Female, age 91, both hemispheres
76.1
Principal sensory trigeminal nucleus nTPM: 118.3
2324
Male, age 76, both hemispheres
166.9
2158
Male, age 61, both hemispheres
118.9
2008
Male, age 80, left hemisphere
105.6
2367
Female, age 91, left hemisphere
82.0
Reticular pontine nucleus, caudal nTPM: 107.1
2332
Male, age 80, right hemisphere
132.4
2092
Male, age 76, both hemispheres
128.8
2457
Female, age 91, both hemispheres
99.7
2559
Male, age 74, both hemispheres
67.6
Reticular pontine nucleus, oral nTPM: 85.6
2167
Male, age 76, both hemispheres
98.4
2012
Female, age 85, both hemispheres
91.3
2366
Female, age 91, both hemispheres
83.8
1939
Male, age 80, both hemispheres
81.1
2361
Male, age 74, both hemispheres
73.3
Reticulotegmental nucleus nTPM: 109.3
2333
Male, age 80, both hemispheres
120.6
2325
Male, age 76, both hemispheres
113.4
2322
Female, age 91, both hemispheres
103.5
2452
Male, age 74, both hemispheres
99.6
Spinal trigeminal nucleus, oral nTPM: 120.4
2164
Male, age 80, both hemispheres
143.9
2737
Female, age 85, both hemispheres
109.7
1978
Male, age 76, both hemispheres
107.7
Subcoeruleus area nTPM: 96.9
2089
Male, age 76, left hemisphere
142.4
2451
Male, age 74, both hemispheres
96.8
1958
Male, age 80, both hemispheres
90.5
2323
Female, age 91, left hemisphere
87.5
2369
Female, age 85, left hemisphere
67.3
Superior olive nTPM: 110.2
2020
Male, age 76, both hemispheres
117.6
2364
Male, age 74, right hemisphere
115.1
2329
Male, age 80, right hemisphere
113.1
2561
Female, age 91, both hemispheres
107.0
1875
Female, age 85, both hemispheres
98.1
Ventral periolivary nuclei nTPM: 120.4
2130
Female, age 85, both hemispheres
153.5
2165
Male, age 80, both hemispheres
130.1
2794
Female, age 91, left hemisphere
103.2
2023
Male, age 76, both hemispheres
94.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 113.6
2161
Male, age 80, both hemispheres
129.8
1959
Male, age 76, both hemispheres
127.9
2449
Male, age 74, both hemispheres
122.2
2456
Female, age 91, both hemispheres
107.5
2359
Male, age 61, both hemispheres
97.9
2840
Female, age 85, both hemispheres
96.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
