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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
11.1
nTPM
HPA Brain:
116.9
nTPM
GTEx:
11.1
nTPM
FANTOM5:
137.9
Scaled Tags Per Million
Pig:
103.8
nTPM
AMYGDALA - HPA Brain RNA-seq
Max nTPM
116.9
Sample id
Sample description
nTPM
Amygdala nTPM: 116.9
2514
Male, age 75, right hemisphere
137.5
1987
Female, age 91, left hemisphere
132.1
2695
Female, age 67, right hemisphere
109.0
2517
Female, age 94, left hemisphere
106.2
2814
Male, age 76, right hemisphere
99.9
Basal amygdala nTPM: 99.6
2110
Male, age 80, left hemisphere
125.5
2609
Male, age 75, right hemisphere
106.9
1955
Male, age 76, both hemispheres
100.9
2243
Female, age 91, right hemisphere
99.6
2685
Female, age 94, left hemisphere
92.8
2827
Female, age 67, right hemisphere
72.0
Central amygdala nTPM: 106.6
2515
Male, age 75, right hemisphere
121.4
2239
Male, age 80, left hemisphere
112.7
2701
Female, age 91, right hemisphere
105.1
2826
Female, age 94, left hemisphere
98.4
1905
Male, age 76, both hemispheres
95.4
Corticomedial amygdala nTPM: 101.7
2428
Male, age 75, right hemisphere
117.3
2242
Female, age 91, right hemisphere
111.3
2829
Male, age 80, left hemisphere
110.5
2429
Female, age 94, left hemisphere
105.1
2240
Male, age 76, both hemispheres
85.6
2535
Female, age 67, right hemisphere
80.2
Lateral amygdala nTPM: 113.8
2516
Male, age 75, right hemisphere
126.9
2534
Female, age 94, left hemisphere
126.1
2255
Female, age 91, right hemisphere
117.1
2256
Male, age 80, left hemisphere
116.7
1883
Male, age 76, both hemispheres
103.2
2830
Female, age 67, right hemisphere
92.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
11.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 11.1
Samples: 152
Max nTPM: 51.9
Min nTPM: 2.8
Std nTPM: 6.8
Median nTPM: 9.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
51.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
44.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
32.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
26.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
26.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
25.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
25.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
23.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
23.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
22.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
22.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
21.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
20.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
20.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
19.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
19.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
18.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
18.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
18.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
17.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
16.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
16.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
16.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
15.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
15.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
15.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
15.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
14.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
14.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
14.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
14.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
14.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
14.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
14.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
14.2
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
14.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
13.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
12.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
12.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
12.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
12.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
12.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
12.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
12.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
11.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
11.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
11.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
11.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
11.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
11.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
11.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
10.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
10.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
10.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
10.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
10.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
10.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
10.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
10.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
10.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
10.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
10.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
10.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
10.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
10.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
10.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
10.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
9.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
9.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
9.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
9.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
9.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
9.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
9.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
9.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
9.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
9.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
9.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
9.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
8.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
8.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
8.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
8.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
8.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
8.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
8.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
8.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
8.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
8.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
8.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
8.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
8.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
8.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
8.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
8.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
8.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
8.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
8.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
7.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
7.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
7.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
7.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
7.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
7.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
7.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
7.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
7.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
7.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
7.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
7.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
7.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
7.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
7.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
7.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
7.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
7.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
7.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
7.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
6.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
6.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
6.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
6.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
6.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
6.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
6.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
6.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
6.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
6.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
6.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
6.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
5.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
5.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
5.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
5.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
5.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
5.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
5.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
5.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
5.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
4.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
4.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
4.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
4.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
4.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
4.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
4.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
4.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
3.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
3.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
3.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
3.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
2.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.