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H2AC6
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                                  • H2AC6
                                  BRAIN MEDULLA OBLONGATA Show tissue menu
                                  AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
                                  MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
                                  ANTIBODIES
                                  AND
                                  VALIDATION
                                  Brain proteome
                                  Medulla oblongata
                                  MEDULLA OBLONGATA - Expression summary
                                  Protein expressioni

                                  On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

                                  Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

                                  If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

                                  No data
                                  RNA expressioni

                                  A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

                                  The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

                                  Scroll down to view mRNA expression data in more detail.
                                  HPA Brain:144.6 nTPM
                                  FANTOM5:159.7 Scaled Tags Per Million
                                  Pig:242.6 nTPM

                                  MEDULLA OBLONGATA - HPA Brain RNA-seq
                                  Max nTPM 144.6
                                  Sample id Sample description nTPM
                                  Area postrema
                                  nTPM: 100.8
                                  2306 Male, age 80, both hemispheres 131.8
                                  2054 Male, age 76, both hemispheres 88.3
                                  2799 Male, age 61, both hemispheres 82.3
                                  Dorsal medullary reticular nucleus
                                  nTPM: 99.9
                                  2088 Male, age 76, both hemispheres 104.7
                                  2373 Male, age 61, both hemispheres 103.6
                                  2040 Female, age 85, both hemispheres 91.5
                                  Dorsal motor vagal complex
                                  nTPM: 119.1
                                  2000 Male, age 74, unknown 137.7
                                  2844 Male, age 55, unknown 136.3
                                  2813 Female, age 72, unknown 129.6
                                  2807 Female, age 85, both hemispheres 126.6
                                  2185 Male, age 76, both hemispheres 122.3
                                  2133 Female, age 91, both hemispheres 113.5
                                  2643 Male, age 74, both hemispheres 108.2
                                  2797 Male, age 61, both hemispheres 78.7
                                  Gigantocellular reticular nuclei, medullary
                                  nTPM: 101.6
                                  2314 Male, age 61, both hemispheres 143.6
                                  2462 Male, age 74, both hemispheres 109.6
                                  1876 Female, age 85, both hemispheres 96.9
                                  2310 Male, age 80, both hemispheres 92.8
                                  2022 Male, age 76, right hemisphere 85.7
                                  2387 Female, age 91, both hemispheres 81.1
                                  Gigantocellular reticular nuclei, pars
                                  nTPM: 91.8
                                  2336 Male, age 61, both hemispheres 98.7
                                  2084 Female, age 85, both hemispheres 95.8
                                  2330 Male, age 80, both hemispheres 93.9
                                  2706 Male, age 80, both hemispheres 88.0
                                  2168 Male, age 76, both hemispheres 82.4
                                  Inferior olive
                                  nTPM: 139.0
                                  2563 Male, age 74, both hemispheres 169.2
                                  2085 Female, age 85, both hemispheres 157.1
                                  2178 Male, age 61, both hemispheres 142.8
                                  2628 Female, age 91, both hemispheres 115.5
                                  2379 Male, age 80, both hemispheres 110.7
                                  Lateral medullary reticular nucleus
                                  nTPM: 144.6
                                  2305 Male, age 74, both hemispheres 202.5
                                  2852 Male, age 80, both hemispheres 154.6
                                  2190 Female, age 85, both hemispheres 152.0
                                  2374 Male, age 61, both hemispheres 136.4
                                  2804 Female, age 91, both hemispheres 124.6
                                  2044 Male, age 76, both hemispheres 97.1
                                  Medial olivary nucleus
                                  nTPM: 130.9
                                  2138 Female, age 91, both hemispheres 147.1
                                  1962 Male, age 76, both hemispheres 134.0
                                  1943 Male, age 61, both hemispheres 129.5
                                  2851 Male, age 80, both hemispheres 112.9
                                  Medial vestibular nucleus
                                  nTPM: 108.2
                                  2801 Male, age 74, both hemispheres 138.4
                                  2743 Female, age 85, both hemispheres 123.5
                                  2134 Male, age 76, both hemispheres 104.4
                                  2093 Male, age 80, both hemispheres 101.9
                                  2803 Female, age 91, both hemispheres 96.7
                                  2624 Male, age 61, both hemispheres 84.6
                                  Motor hypoglossal nucleus
                                  nTPM: 110.9
                                  2182 Male, age 80, both hemispheres 144.4
                                  2132 Female, age 85, both hemispheres 121.1
                                  2125 Female, age 91, both hemispheres 115.1
                                  2277 Male, age 76, both hemispheres 98.7
                                  2461 Male, age 61, both hemispheres 75.1
                                  Nucleus ambiguus
                                  nTPM: 144.4
                                  2071 Male, age 76, both hemispheres 177.1
                                  2096 Female, age 85, both hemispheres 111.8
                                  Nucleus cuneatus
                                  nTPM: 103.0
                                  2808 Female, age 85, both hemispheres 139.8
                                  2564 Male, age 74, both hemispheres 133.4
                                  2100 Male, age 76, both hemispheres 112.9
                                  2380 Male, age 80, both hemispheres 105.4
                                  2381 Male, age 80, both hemispheres 100.9
                                  2131 Male, age 76, both hemispheres 93.2
                                  2805 Female, age 91, both hemispheres 85.2
                                  2562 Male, age 61, both hemispheres 85.0
                                  2376 Male, age 61, both hemispheres 70.9
                                  Nucleus gracilis
                                  nTPM: 138.9
                                  2299 Female, age 85, both hemispheres 156.2
                                  2627 Male, age 74, both hemispheres 140.2
                                  2382 Male, age 80, both hemispheres 120.2
                                  Nucleus raphe obscurus
                                  nTPM: 129.5
                                  2845 Female, age 85, midline 143.6
                                  2142 Male, age 76, midline 142.6
                                  2800 Male, age 61, midline 102.2
                                  Nucleus raphe pallidus
                                  nTPM: 120.7
                                  1924 Male, age 61, midline 139.5
                                  2183 Male, age 80, midline 127.1
                                  2145 Male, age 76, midline 95.4
                                  Nucleus tractus solitarii
                                  nTPM: 100.1
                                  2191 Female, age 85, both hemispheres 130.8
                                  2307 Male, age 80, both hemispheres 111.2
                                  2656 Male, age 76, both hemispheres 102.5
                                  2144 Female, age 91, right hemisphere 56.0
                                  Parvicellular reticular nuclei
                                  nTPM: 101.2
                                  2095 Male, age 76, both hemispheres 111.4
                                  2119 Male, age 80, both hemispheres 101.2
                                  2558 Male, age 74, both hemispheres 91.1
                                  Parvicellular reticular nuclei, medullary
                                  nTPM: 108.8
                                  2091 Female, age 85, both hemispheres 112.9
                                  2189 Female, age 91, both hemispheres 108.6
                                  2181 Male, age 80, left hemisphere 104.8
                                  Peritrigeminal nucleus
                                  nTPM: 132.3
                                  2067 Female, age 85, both hemispheres 162.8
                                  2179 Male, age 61, both hemispheres 118.6
                                  2136 Male, age 76, both hemispheres 115.6
                                  Prepositus hypoglossal nucleus
                                  nTPM: 121.1
                                  2855 Female, age 85, right hemisphere 123.1
                                  2086 Male, age 80, both hemispheres 119.1
                                  Spinal trigeminal nucleus, caudal
                                  nTPM: 118.4
                                  2312 Male, age 61, both hemispheres 140.0
                                  2642 Male, age 74, both hemispheres 125.2
                                  2308 Male, age 80, both hemispheres 121.9
                                  2447 Male, age 76, both hemispheres 106.1
                                  2390 Female, age 91, both hemispheres 98.5
                                  Spinal trigeminal nucleus, interpolar
                                  nTPM: 94.7
                                  2033 Male, age 80, both hemispheres 108.1
                                  2066 Male, age 76, right hemisphere 100.8
                                  2386 Female, age 85, both hemispheres 100.5
                                  2389 Female, age 91, both hemispheres 83.8
                                  2625 Male, age 61, both hemispheres 80.3
                                  Spinal vestibular nucleus
                                  nTPM: 106.2
                                  2748 Male, age 76, both hemispheres 132.8
                                  2186 Female, age 91, both hemispheres 111.9
                                  2806 Female, age 85, both hemispheres 110.8
                                  2780 Male, age 80, both hemispheres 105.6
                                  2384 Male, age 74, both hemispheres 97.3
                                  2796 Male, age 61, both hemispheres 78.5
                                  Superior vestibular nucleus
                                  nTPM: 127.1
                                  2383 Male, age 74, both hemispheres 140.9
                                  2061 Male, age 76, both hemispheres 126.3
                                  2015 Male, age 80, both hemispheres 114.1
                                  Ventral medullary reticular nucleus
                                  nTPM: 116.4
                                  2060 Male, age 76, both hemispheres 119.0
                                  2372 Male, age 61, both hemispheres 113.9
                                  Ventrolateral medulla, A1-C1 cell groups
                                  nTPM: 124.0
                                  2302 Female, age 91, both hemispheres 137.5
                                  2118 Male, age 80, both hemispheres 135.6
                                  2741 Female, age 85, both hemispheres 124.0
                                  2180 Male, age 61, both hemispheres 118.5
                                  1986 Male, age 76, both hemispheres 104.4

                                  MEDULLA OBLONGATA - FANTOM5 CAGEi

                                  RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

                                  Max Scaled Tags Per Million 159.7
                                  FANTOM5 sample id Sample description Scaled Tags Per Million
                                  Medulla oblongata
                                  Scaled Tags Per Million: 159.7
                                  FF:10174-103C3 60 years, female 201.1
                                  FF:10155-103A2 76 years, female 144.6
                                  FF:10038-101F2 18-64 years, mixed 133.3

                                  MEDULLA OBLONGATA - Pig RNA-seqi

                                  RNA-seq data obtained from pig brain is reported as nTPM .

                                  Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
                                  Average nTPM 242.6
                                  Pig sample Sample description nTPM
                                  202.1243.8284.4190.3292.6020406080100120140160180200220240260280
                                  202.1243.8284.4190.3292.6020406080100120140160180200220240260280
                                  Medulla oblongata
                                  nTPM: 242.7
                                  Samples: 4

                                  Max nTPM: 292.6
                                  Min nTPM: 190.3
                                  Sample A Female 206.0
                                  Sample B Female 190.3
                                  Sample C Male 281.7
                                  Sample D Male 292.6

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