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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
179.7
nTPM
Monaco:
231.9
nTPM
Schmiedel:
161.5
TPM
B-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
179.7
HPA sample
nTPM
Memory B-cell nTPM: 179.7
Samples: 6
Max nTPM: 220.0
Min nTPM: 112.7
P10809_1017
112.7
P10809_1025
220.0
P10809_1044
208.7
P10809_1063
164.6
P10809_1092
195.4
P10809_1105
176.7
Naive B-cell nTPM: 179.4
Samples: 6
Max nTPM: 276.1
Min nTPM: 117.5
P10809_1011
117.5
P10809_1029
166.3
P10809_1048
276.1
P10809_1067
183.7
P10809_1091
175.4
P10809_1104
157.5
B-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
231.9
Monaco sample
nTPM
Exhausted memory B-cell nTPM: 226.5
Samples: 4
Max nTPM: 284.3
Min nTPM: 153.0
RHH5310_R3677
284.3
RHH5218_R3590
153.0
RHH5247_R3619
239.9
RHH5276_R3648
228.7
Naive B-cell nTPM: 209.0
Samples: 4
Max nTPM: 246.6
Min nTPM: 134.5
RHH5308_R3675
221.0
RHH5216_R3588
246.6
RHH5245_R3617
134.5
RHH5274_R3646
234.0
Non-switched memory B-cell nTPM: 229.1
Samples: 4
Max nTPM: 238.4
Min nTPM: 220.8
RHH5309_R3676
232.7
RHH5217_R3589
220.8
RHH5246_R3618
238.4
RHH5275_R3647
224.4
Plasmablast nTPM: 231.9
Samples: 4
Max nTPM: 248.0
Min nTPM: 206.3
RHH5312_R3679
248.0
RHH5220_R3592
206.3
RHH5249_R3621
226.5
RHH5278_R3650
246.8
Switched memory B-cell nTPM: 211.4
Samples: 4
Max nTPM: 266.3
Min nTPM: 159.2
RHH5311_R3678
266.3
RHH5219_R3591
159.2
RHH5248_R3620
215.8
RHH5277_R3649
204.2
B-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
