HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:154.0 nTPM
HPA Brain:76.2 nTPM
GTEx:154.0 nTPM
FANTOM5:123.8 Scaled Tags Per Million
Pig:14.8 nTPM
Mouse:37.1 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052098
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 76.2
Sample id Sample description nTPM
Hippocampus
nTPM: 68.1
2529 Female, age 94, left hemisphere 88.5
1898 Male, age 80, left hemisphere 80.2
2621 Female, age 67, right hemisphere 73.8
2148 Female, age 91, left hemisphere 65.9
1855 Male, age 76, left hemisphere 51.8
1911 Female, age 85, right hemisphere 48.3
Dentate gyrus
nTPM: 68.8
2530 Female, age 94, left hemisphere 109.2
2531 Female, age 67, both hemispheres 79.7
2246 Female, age 85, both hemispheres 63.1
2010 Male, age 76, both hemispheres 54.7
2528 Male, age 74, both hemispheres 54.0
1927 Female, age 91, both hemispheres 52.1
Entorhinal gyrus
nTPM: 76.2
2764 Male, age 80, right hemisphere 80.3
2117 Female, age 91, right hemisphere 78.4
2686 Male, age 75, right hemisphere 76.8
2613 Female, age 94, left hemisphere 76.2
1938 Female, age 85, left hemisphere 72.8
1787 Male, age 76, left hemisphere 72.7
Hippocampus, CA1
nTPM: 53.0
2527 Male, age 74, both hemispheres 63.7
2749 Male, age 80, left hemisphere 58.3
1873 Female, age 85, both hemispheres 50.5
2082 Female, age 91, right hemisphere 49.6
2045 Male, age 76, both hemispheres 43.0
Hippocampus, CA2
nTPM: 63.4
2437 Female, age 94, left hemisphere 76.8
1963 Male, age 80, left hemisphere 68.2
1940 Female, age 85, left hemisphere 66.0
1892 Male, age 76, both hemispheres 62.1
2113 Female, age 91, right hemisphere 57.8
2249 Male, age 74, both hemispheres 49.6
Hippocampus, CA3
nTPM: 58.6
2861 Female, age 67, both hemispheres 82.2
2436 Male, age 74, both hemispheres 56.0
1891 Female, age 85, both hemispheres 55.0
1867 Male, age 76, both hemispheres 53.1
2620 Female, age 94, left hemisphere 53.1
2137 Male, age 80, left hemisphere 52.1
Parahippocampal cortex
nTPM: 71.4
2245 Female, age 91, both hemispheres 91.0
2532 Female, age 72, left hemisphere 84.4
2622 Female, age 67, right hemisphere 84.1
1850 Male, age 80, both hemispheres 70.9
2250 Female, age 67, right hemisphere 70.1
1990 Female, age 91, right hemisphere 68.0
1933 Female, age 85, both hemispheres 67.1
2692 Male, age 74, both hemispheres 65.6
2018 Male, age 76, both hemispheres 59.6
2693 Female, age 94, both hemispheres 52.9
Perirhinal gyrus
nTPM: 68.2
1794 Male, age 80, right hemisphere 79.6
2521 Female, age 94, right hemisphere 70.9
1841 Female, age 85, right hemisphere 66.1
1847 Female, age 91, left hemisphere 63.3
2848 Male, age 76, right hemisphere 61.1
Subiculum
nTPM: 63.8
2438 Female, age 94, left hemisphere 76.1
2619 Male, age 74, both hemispheres 71.3
1901 Male, age 80, both hemispheres 68.8
1977 Female, age 85, both hemispheres 68.1
2042 Male, age 76, both hemispheres 54.4
2729 Female, age 91, right hemisphere 44.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 154.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 154.0
Samples: 197

Max nTPM: 448.3
Min nTPM: 63.9
Std nTPM: 44.6
Median nTPM: 146.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 448.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 298.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 288.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 288.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 288.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 250.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 239.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 238.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 228.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 228.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 228.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 123.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 123.8
FF:10169-103B7 60 years, female 129.8
FF:10153-102I9 76 years, female 117.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.8
Pig sample Sample description nTPM
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 16.8
Min nTPM: 11.1
Sample A Female 16.8
Sample B Female 14.4
Sample C Male 12.7
Sample D Male 11.1
Dorsal hippocampus
nTPM: 14.8
Samples: 4

Max nTPM: 18.5
Min nTPM: 12.0
Sample A Female 18.5
Sample B Female 12.8
Sample C Male 15.8
Sample D Male 12.0
Entorhinal cortex
nTPM: 13.7
Samples: 4

Max nTPM: 14.3
Min nTPM: 12.9
Sample A Female 14.3
Sample B Female 14.3
Sample C Male 13.2
Sample D Male 12.9
Ventral hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 16.5
Min nTPM: 12.5
Sample A Female 14.5
Sample B Female 12.5
Sample C Male 16.5
Sample D Male 13.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 37.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.1
Samples: 4

Max nTPM: 38.8
Min nTPM: 35.1
Sample A Male 38.3
Sample B Male 38.8
Sample C Female 35.1
Sample D Female 36.2
Hippocampal formation
nTPM: 36.7
Samples: 4

Max nTPM: 38.9
Min nTPM: 35.4
Sample A Male 38.9
Sample B Male 35.7
Sample C Female 36.7
Sample D Female 35.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69262235 Antisense, RP_050301_01_G04, Mouse strain C57BL/6J (56 days, male) 2.0

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