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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
725.7
nTPM
HPA Brain:
160.4
nTPM
GTEx:
725.7
nTPM
FANTOM5:
56.5
Scaled Tags Per Million
Pig:
213.5
nTPM
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max nTPM
160.4
Sample id
Sample description
nTPM
Amygdala nTPM: 160.4
2695
Female, age 67, right hemisphere
186.9
2514
Male, age 75, right hemisphere
174.7
1987
Female, age 91, left hemisphere
154.6
2814
Male, age 76, right hemisphere
147.5
2517
Female, age 94, left hemisphere
138.5
Basal amygdala nTPM: 125.5
2609
Male, age 75, right hemisphere
139.1
2827
Female, age 67, right hemisphere
136.3
2685
Female, age 94, left hemisphere
133.2
2110
Male, age 80, left hemisphere
126.4
1955
Male, age 76, both hemispheres
120.6
2243
Female, age 91, right hemisphere
97.5
Central amygdala nTPM: 132.8
2826
Female, age 94, left hemisphere
192.7
2515
Male, age 75, right hemisphere
139.8
1905
Male, age 76, both hemispheres
128.4
2239
Male, age 80, left hemisphere
110.7
2701
Female, age 91, right hemisphere
92.2
Corticomedial amygdala nTPM: 118.9
2829
Male, age 80, left hemisphere
134.3
2429
Female, age 94, left hemisphere
130.9
2428
Male, age 75, right hemisphere
125.0
2242
Female, age 91, right hemisphere
119.7
2240
Male, age 76, both hemispheres
102.7
2535
Female, age 67, right hemisphere
100.5
Lateral amygdala nTPM: 132.7
2516
Male, age 75, right hemisphere
177.3
2830
Female, age 67, right hemisphere
161.1
2534
Female, age 94, left hemisphere
157.0
1883
Male, age 76, both hemispheres
121.8
2256
Male, age 80, left hemisphere
93.0
2255
Female, age 91, right hemisphere
85.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
725.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 725.7
Samples: 152
Max nTPM: 2297.0
Min nTPM: 385.8
Std nTPM: 299.2
Median nTPM: 643.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
2297.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
2165.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
1870.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
1796.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
1638.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1565.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
1476.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
1204.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
1161.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
1161.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
1035.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1033.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
987.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
981.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
962.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
952.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
944.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
943.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
939.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
934.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
925.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
921.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
916.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
908.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
886.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
873.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
867.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
860.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
852.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
852.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
847.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
837.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
834.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
832.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
831.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
827.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
825.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
813.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
806.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
794.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
791.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
788.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
787.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
786.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
778.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
771.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
771.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
763.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
762.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
759.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
744.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
741.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
736.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
734.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
731.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
731.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
721.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
716.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
713.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
713.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
703.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
691.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
684.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
683.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
682.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
678.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
677.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
672.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
666.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
664.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
663.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
652.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
648.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
645.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
645.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
644.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
641.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
638.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
638.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
638.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
635.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
634.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
625.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
621.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
620.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
619.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
616.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
614.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
610.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
609.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
608.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
608.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
603.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
602.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
601.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
599.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
596.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
595.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
595.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
592.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
592.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
587.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
586.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
585.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
585.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
584.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
584.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
576.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
576.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
573.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
569.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
566.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
563.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
557.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
556.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
555.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
549.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
540.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
540.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
537.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
533.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
531.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
529.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
526.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
526.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
525.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
520.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
510.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
509.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
500.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
493.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
491.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
484.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
484.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
480.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
477.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
476.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
475.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
475.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
473.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
469.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
468.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
452.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
447.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
442.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
442.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
438.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
435.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
425.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
418.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
405.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
385.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.