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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
154.7
nTPM
FANTOM5:
67.9
Scaled Tags Per Million
Pig:
289.3
nTPM
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
154.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 142.9
2188
Female, age 91, both hemispheres
166.0
2090
Male, age 80, both hemispheres
152.6
1984
Male, age 76, both hemispheres
131.3
2301
Female, age 85, both hemispheres
121.8
Dorsal cochlear nucleus nTPM: 135.7
2802
Male, age 74, right hemisphere
161.4
2187
Female, age 91, both hemispheres
157.9
2370
Male, age 61, both hemispheres
134.2
2378
Male, age 80, both hemispheres
124.6
2058
Male, age 76, both hemispheres
100.4
Dorsal tegmental nucleus nTPM: 154.7
2326
Male, age 74, both hemispheres
169.3
2083
Male, age 80, both hemispheres
164.2
2358
Male, age 61, both hemispheres
146.4
1936
Male, age 76, left hemisphere
138.8
Dorsolateral tegmental area nTPM: 152.4
2654
Male, age 80, both hemispheres
194.3
2751
Female, age 85, both hemispheres
157.7
2337
Male, age 61, both hemispheres
145.3
2360
Male, age 74, both hemispheres
141.4
2141
Male, age 76, both hemispheres
123.3
Kolliker-Fuse nucleus nTPM: 149.9
2315
Male, age 76, right hemisphere
181.8
2163
Male, age 80, both hemispheres
137.0
2793
Female, age 91, left hemisphere
130.9
Lateral lemniscal nuclei nTPM: 113.4
2169
Male, age 76, both hemispheres
119.4
2746
Female, age 85, left hemisphere
115.0
2453
Male, age 74, right hemisphere
114.8
2036
Male, age 80, both hemispheres
113.1
2320
Female, age 91, left hemisphere
104.7
Lateral parabrachial nucleus nTPM: 143.6
2013
Male, age 80, both hemispheres
167.3
2792
Male, age 76, both hemispheres
155.4
2139
Female, age 85, right hemisphere
141.9
2790
Male, age 61, both hemispheres
109.9
Lateral vestibular nucleus nTPM: 127.0
2311
Male, age 80, both hemispheres
145.9
2184
Male, age 76, both hemispheres
108.2
Locus coeruleus nTPM: 129.8
2720
Male, age 74, both hemispheres
153.3
2123
Female, age 91, both hemispheres
148.6
2014
Male, age 55, unknown
128.7
2162
Male, age 80, both hemispheres
126.2
2317
Female, age 72, unknown
124.8
1980
Male, age 76, both hemispheres
116.9
2788
Male, age 74, unknown
110.4
Medial parabrachial nucleus nTPM: 143.6
2170
Female, age 91, both hemispheres
184.8
2463
Female, age 85, right hemisphere
147.3
2854
Male, age 80, both hemispheres
147.3
2786
Male, age 76, both hemispheres
128.8
2156
Male, age 61, both hemispheres
110.1
Medial periolivary nuclei nTPM: 119.4
2063
Male, age 76, both hemispheres
138.7
2791
Male, age 74, right hemisphere
130.7
2081
Male, age 80, both hemispheres
116.2
2458
Female, age 91, both hemispheres
107.9
2171
Female, age 85, both hemispheres
103.4
Motor facial nucleus nTPM: 121.7
2062
Male, age 76, both hemispheres
136.2
2365
Male, age 74, right hemisphere
134.5
2126
Male, age 61, both hemispheres
132.6
2795
Female, age 91, both hemispheres
124.4
2697
Female, age 85, both hemispheres
117.5
2327
Male, age 80, both hemispheres
85.1
Motor trigeminal nucleus nTPM: 125.4
2335
Male, age 61, both hemispheres
146.1
2560
Male, age 74, both hemispheres
133.6
2309
Male, age 76, both hemispheres
132.3
2321
Female, age 91, both hemispheres
111.9
2079
Male, age 80, both hemispheres
102.9
Nuclei of the trapezoid body nTPM: 115.3
1983
Male, age 76, both hemispheres
161.2
2159
Male, age 61, both hemispheres
115.3
2166
Male, age 80, both hemispheres
106.2
2735
Female, age 85, both hemispheres
104.3
2368
Female, age 91, both hemispheres
89.3
Nucleus raphe magnus nTPM: 112.3
2160
Male, age 61, both hemispheres
123.7
2051
Male, age 76, both hemispheres
121.6
2455
Male, age 74, both hemispheres
119.6
2328
Male, age 80, both hemispheres
107.1
2172
Female, age 85, both hemispheres
101.4
2459
Female, age 91, both hemispheres
100.6
Paramedian reticular nucleus nTPM: 131.8
2050
Female, age 85, both hemispheres
133.6
2052
Male, age 76, both hemispheres
133.4
2057
Male, age 80, both hemispheres
130.3
2313
Male, age 61, both hemispheres
129.8
Pedunculopontine tegmental nucleus nTPM: 139.4
2338
Male, age 61, both hemispheres
156.8
2334
Male, age 80, both hemispheres
139.1
1921
Female, age 85, both hemispheres
122.3
Pontine nuclei nTPM: 131.1
1863
Male, age 55, unknown
151.0
2319
Female, age 91, both hemispheres
142.7
2454
Male, age 74, left hemisphere
136.7
1968
Male, age 76, left hemisphere
132.5
2109
Female, age 72, unknown
129.2
2787
Female, age 85, both hemispheres
127.3
2727
Male, age 61, right hemisphere
115.7
2115
Male, age 80, left hemisphere
113.3
Pontine raphe nucleus nTPM: 127.2
2853
Male, age 76, midline
129.0
2122
Female, age 85, midline
125.4
Posteroventral cochlear nucleus nTPM: 152.9
2135
Female, age 91, both hemispheres
178.2
2341
Male, age 80, both hemispheres
175.4
2070
Male, age 76, both hemispheres
145.5
2752
Female, age 85, both hemispheres
134.5
2371
Male, age 61, both hemispheres
131.1
Principal sensory trigeminal nucleus nTPM: 114.0
2158
Male, age 61, both hemispheres
128.8
2367
Female, age 91, left hemisphere
117.4
2324
Male, age 76, both hemispheres
107.0
2008
Male, age 80, left hemisphere
102.8
Reticular pontine nucleus, caudal nTPM: 127.2
2559
Male, age 74, both hemispheres
155.6
2092
Male, age 76, both hemispheres
149.3
2457
Female, age 91, both hemispheres
121.0
2332
Male, age 80, right hemisphere
82.9
Reticular pontine nucleus, oral nTPM: 145.6
2366
Female, age 91, both hemispheres
171.0
1939
Male, age 80, both hemispheres
163.8
2167
Male, age 76, both hemispheres
137.0
2361
Male, age 74, both hemispheres
133.2
2012
Female, age 85, both hemispheres
123.3
Reticulotegmental nucleus nTPM: 121.6
2452
Male, age 74, both hemispheres
142.2
2322
Female, age 91, both hemispheres
121.5
2325
Male, age 76, both hemispheres
111.9
2333
Male, age 80, both hemispheres
110.8
Spinal trigeminal nucleus, oral nTPM: 122.7
1978
Male, age 76, both hemispheres
130.6
2164
Male, age 80, both hemispheres
123.5
2737
Female, age 85, both hemispheres
113.9
Subcoeruleus area nTPM: 140.0
2369
Female, age 85, left hemisphere
160.9
2451
Male, age 74, both hemispheres
154.5
1958
Male, age 80, both hemispheres
145.2
2323
Female, age 91, left hemisphere
130.0
2089
Male, age 76, left hemisphere
109.4
Superior olive nTPM: 127.3
2020
Male, age 76, both hemispheres
149.0
2364
Male, age 74, right hemisphere
140.3
1875
Female, age 85, both hemispheres
133.6
2561
Female, age 91, both hemispheres
119.7
2329
Male, age 80, right hemisphere
93.7
Ventral periolivary nuclei nTPM: 129.6
2023
Male, age 76, both hemispheres
164.1
2794
Female, age 91, left hemisphere
123.0
2165
Male, age 80, both hemispheres
121.1
2130
Female, age 85, both hemispheres
110.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 125.4
1959
Male, age 76, both hemispheres
142.9
2359
Male, age 61, both hemispheres
133.8
2840
Female, age 85, both hemispheres
129.4
2161
Male, age 80, both hemispheres
125.5
2449
Male, age 74, both hemispheres
120.4
2456
Female, age 91, both hemispheres
100.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
