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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
316.4
nTPM
GTEx:
316.4
nTPM
FANTOM5:
71.0
Scaled Tags Per Million
Pig:
66.1
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
316.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 316.4
Samples: 105
Max nTPM: 518.6
Min nTPM: 215.5
Std nTPM: 56.8
Median nTPM:
491_1
89 years, female
518.6
490_1
67 years, female
446.5
495_1
57 years, female
444.6
414_1
84 years, female
441.5
35_1
74 years, female
412.0
413_1
59 years, female
411.9
17_1
71 years, male
404.9
501_1
88 years, male
402.1
415_1
77 years, female
399.9
307_1
66 years, female
397.0
315_1
62 years, female
392.4
142_1
61 years, female
384.2
379_1
60 years, male
376.9
246_1
77 years, male
374.9
162_1
79 years, female
374.2
139_1
64 years, female
374.0
466_1
57 years, female
372.7
153_1
70 years, female
371.3
126_1
63 years, male
368.3
237_1
82 years, male
361.0
120_1
70 years, female
359.1
384_1
83 years, male
358.3
322_1
76 years, male
355.9
145_1
84 years, male
354.6
308_1
70 years, female
354.2
41_1
94 years, female
353.5
347_1
72 years, male
349.5
321_1
62 years, female
347.3
526_1
61 years, male
346.1
119_1
70 years, female
345.9
89_1
63 years, male
345.1
389_1
86 years, female
342.9
2_1
77 years, female
342.4
375_1
74 years, female
339.3
117_1
61 years, male
338.7
137_1
83 years, male
338.7
499_1
55 years, female
337.5
265_1
87 years, male
336.4
173_1
67 years, male
335.9
4_1
88 years, female
335.2
396_1
62 years, male
334.7
311_1
78 years, male
332.5
42_1
85 years, male
330.0
189_1
76 years, male
326.9
81_1
67 years, male
326.2
6_1
73 years, female
325.9
320_1
89 years, female
322.3
266_1
85 years, male
321.4
404_1
82 years, female
321.1
518_1
75 years, female
316.9
386_1
76 years, male
316.4
218_1
71 years, female
315.7
254_1
77 years, female
313.3
377_1
82 years, female
312.4
217_1
76 years, male
311.2
447_1
81 years, male
309.2
452_1
88 years, female
309.2
18_1
88 years, male
307.8
319_1
81 years, male
307.3
288_1
66 years, female
303.4
394_1
75 years, female
303.4
32_1
67 years, male
303.2
468_1
89 years, male
301.8
376_1
75 years, female
301.6
405_1
91 years, male
301.1
354_1
81 years, female
297.7
109_1
81 years, female
291.8
229_1
69 years, female
289.5
313_1
79 years, female
289.4
355_1
70 years, female
287.4
324_1
76 years, male
285.5
149_1
88 years, male
283.4
177_1
74 years, male
283.1
480_1
63 years, male
279.1
99_1
64 years, male
278.8
316_1
62 years, male
276.0
406_1
79 years, male
272.8
243_1
75 years, male
272.4
295_1
61 years, female
271.7
314_1
67 years, male
271.6
115_1
83 years, male
270.6
503_1
68 years, male
266.0
348_1
84 years, male
265.8
351_1
91 years, male
265.4
335_1
73 years, female
264.9
43_1
64 years, female
264.8
317_1
60 years, male
262.5
425_1
59 years, female
255.1
172_1
72 years, female
254.7
352_1
62 years, male
252.9
349_1
83 years, male
250.3
264_1
73 years, female
249.9
251_1
78 years, male
249.5
506_1
65 years, male
247.8
318_1
68 years, male
247.0
286_1
68 years, female
244.4
291_1
76 years, male
243.2
517_1
88 years, male
240.9
353_1
82 years, female
234.9
350_1
84 years, female
233.0
293_1
68 years, female
225.1
163_1
78 years, male
223.9
9_1
66 years, female
220.9
356_1
87 years, female
219.3
292_1
71 years, male
215.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.