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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1424.6
nTPM
Monaco:
1267.7
nTPM
Schmiedel:
435.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1424.6
HPA sample
nTPM
gdT-cell nTPM: 1059.1
Samples: 6
Max nTPM: 1444.6
Min nTPM: 579.0
P10809_1007
579.0
P10809_1022
1401.6
P10809_1041
1444.6
P10809_1060
888.3
P10809_1077
1045.2
P10809_1098
995.8
MAIT T-cell nTPM: 981.5
Samples: 6
Max nTPM: 1422.5
Min nTPM: 557.5
P10809_1006
557.5
P10809_1024
1422.5
P10809_1043
1169.6
P10809_1062
952.8
P10809_1083
851.3
P10809_1097
935.3
Memory CD4 T-cell nTPM: 965.7
Samples: 6
Max nTPM: 1251.4
Min nTPM: 523.7
P10809_1014
523.7
P10809_1026
1041.2
P10809_1045
1251.4
P10809_1064
1025.9
P10809_1086
953.4
P10809_1113
998.8
Memory CD8 T-cell nTPM: 1038.2
Samples: 5
Max nTPM: 1229.6
Min nTPM: 696.7
P10809_1012
696.7
P10809_1027
1095.4
P10809_1046
1229.6
P10809_1065
1108.3
P10809_1111
1061.1
Naive CD4 T-cell nTPM: 1066.9
Samples: 6
Max nTPM: 1703.6
Min nTPM: 505.4
P10809_1015
505.4
P10809_1030
1042.7
P10809_1049
1703.6
P10809_1068
1034.0
P10809_1085
1103.1
P10809_1112
1012.6
Naive CD8 T-cell nTPM: 921.2
Samples: 6
Max nTPM: 1197.6
Min nTPM: 474.5
P10809_1016
474.5
P10809_1031
974.1
P10809_1050
1015.2
P10809_1069
1197.6
P10809_1087
961.9
P10809_1110
903.6
T-reg nTPM: 1424.6
Samples: 6
Max nTPM: 2249.3
Min nTPM: 667.0
P10809_1018
667.0
P10809_1037
1470.9
P10809_1056
2249.3
P10809_1075
1200.2
P10809_1094
1419.8
P10809_1106
1540.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1267.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 930.7
Samples: 4
Max nTPM: 1281.6
Min nTPM: 592.9
RHH5202_R3573
1281.6
RHH5230_R3602
935.3
RHH5259_R3631
592.9
RHH5288_R3660
913.0
Effector memory CD8 T-cell nTPM: 1194.8
Samples: 4
Max nTPM: 1399.7
Min nTPM: 912.2
RHH5203_R3574
1399.7
RHH5231_R3603
1098.8
RHH5260_R3632
912.2
RHH5289_R3661
1368.4
MAIT T-cell nTPM: 1072.0
Samples: 4
Max nTPM: 1253.6
Min nTPM: 941.1
RHH5233_R3605
1063.2
RHH5205_R3576
1253.6
RHH5262_R3634
941.1
RHH5297_R3663
1029.9
Memory CD4 T-cell TFH nTPM: 1089.2
Samples: 4
Max nTPM: 1337.8
Min nTPM: 702.7
RHH5300_R3666
992.6
RHH5236_R3608
1323.7
RHH5265_R3637
702.7
RHH5208_R3579
1337.8
Memory CD4 T-cell Th1 nTPM: 963.1
Samples: 4
Max nTPM: 1273.0
Min nTPM: 637.2
RHH5210_R3581
1273.0
RHH5302_R3668
1081.7
RHH5238_R3610
637.2
RHH5267_R3639
860.4
Memory CD4 T-cell Th1/Th17 nTPM: 1097.4
Samples: 4
Max nTPM: 1472.7
Min nTPM: 806.3
RHH5303_R3669
1472.7
RHH5211_R3582
1274.4
RHH5239_R3611
806.3
RHH5268_R3640
836.0
Memory CD4 T-cell Th17 nTPM: 1112.8
Samples: 4
Max nTPM: 1274.2
Min nTPM: 855.0
RHH5304_R3670
1274.2
RHH5212_R3583
1174.4
RHH5240_R3612
1147.5
RHH5269_R3641
855.0
Memory CD4 T-cell Th2 nTPM: 1102.1
Samples: 4
Max nTPM: 1366.9
Min nTPM: 911.6
RHH5305_R3671
1192.1
RHH5213_R3584
1366.9
RHH5241_R3613
937.7
RHH5270_R3642
911.6
Naive CD4 T-cell nTPM: 1054.1
Samples: 4
Max nTPM: 1535.1
Min nTPM: 810.3
RHH5306_R3672
1057.1
RHH5214_R3585
1535.1
RHH5242_R3614
810.3
RHH5271_R3643
813.9
Naive CD8 T-cell nTPM: 864.9
Samples: 4
Max nTPM: 1281.3
Min nTPM: 572.9
RHH5201_R3572
1281.3
RHH5229_R3601
572.9
RHH5258_R3630
753.7
RHH5287_R3659
851.7
Non-Vd2 gdTCR nTPM: 1267.7
Samples: 4
Max nTPM: 1510.7
Min nTPM: 1060.5
RHH5235_R3607
1060.5
RHH5264_R3636
1274.6
RHH5207_R3578
1510.7
RHH5299_R3665
1225.0
T-reg nTPM: 1103.5
Samples: 4
Max nTPM: 1248.6
Min nTPM: 870.8
RHH5301_R3667
1079.6
RHH5237_R3609
1248.6
RHH5266_R3638
870.8
RHH5209_R3580
1214.8
Terminal effector memory CD4 T-cell nTPM: 1077.1
Samples: 2
Max nTPM: 1091.5
Min nTPM: 1062.6
RHH5243_R3615
1091.5
RHH5272_R3644
1062.6
Terminal effector memory CD8 T-cell nTPM: 1224.3
Samples: 4
Max nTPM: 1358.7
Min nTPM: 1053.8
RHH5232_R3604
1168.1
RHH5204_R3575
1316.5
RHH5261_R3633
1053.8
RHH5296_R3662
1358.7
Vd2 gdTCR nTPM: 1188.1
Samples: 4
Max nTPM: 1487.2
Min nTPM: 1033.5
RHH5234_R3606
1085.2
RHH5206_R3577
1487.2
RHH5263_R3635
1146.3
RHH5298_R3664
1033.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
