HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni
Consensus:67.3 nTPM
HPA Brain:116.3 nTPM
GTEx:67.3 nTPM
FANTOM5:185.1 Scaled Tags Per Million
Pig:108.8 nTPM
Mouse:5.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068431Antibody CAB012235
Glial cells HighHigh
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 116.3
Sample id Sample description nTPM
Hippocampus
nTPM: 97.9
2621 Female, age 67, right hemisphere 112.0
2148 Female, age 91, left hemisphere 109.1
1898 Male, age 80, left hemisphere 95.9
1911 Female, age 85, right hemisphere 93.9
2529 Female, age 94, left hemisphere 91.0
1855 Male, age 76, left hemisphere 85.4
Dentate gyrus
nTPM: 98.4
2531 Female, age 67, both hemispheres 122.0
2010 Male, age 76, both hemispheres 100.3
1927 Female, age 91, both hemispheres 99.1
2530 Female, age 94, left hemisphere 95.8
2528 Male, age 74, both hemispheres 87.3
2246 Female, age 85, both hemispheres 86.0
Entorhinal gyrus
nTPM: 116.3
2764 Male, age 80, right hemisphere 143.0
2613 Female, age 94, left hemisphere 125.2
1938 Female, age 85, left hemisphere 118.0
1787 Male, age 76, left hemisphere 114.0
2117 Female, age 91, right hemisphere 108.6
2686 Male, age 75, right hemisphere 89.0
Hippocampus, CA1
nTPM: 93.1
2045 Male, age 76, both hemispheres 118.3
1873 Female, age 85, both hemispheres 102.5
2749 Male, age 80, left hemisphere 94.5
2527 Male, age 74, both hemispheres 82.5
2082 Female, age 91, right hemisphere 67.7
Hippocampus, CA2
nTPM: 85.1
2249 Male, age 74, both hemispheres 95.2
1940 Female, age 85, left hemisphere 91.7
2437 Female, age 94, left hemisphere 90.2
1892 Male, age 76, both hemispheres 80.8
2113 Female, age 91, right hemisphere 77.1
1963 Male, age 80, left hemisphere 75.9
Hippocampus, CA3
nTPM: 108.9
2620 Female, age 94, left hemisphere 182.8
2861 Female, age 67, both hemispheres 122.5
1867 Male, age 76, both hemispheres 101.4
1891 Female, age 85, both hemispheres 86.9
2436 Male, age 74, both hemispheres 83.7
2137 Male, age 80, left hemisphere 76.4
Parahippocampal cortex
nTPM: 103.2
2622 Female, age 67, right hemisphere 124.2
2532 Female, age 72, left hemisphere 116.6
2245 Female, age 91, both hemispheres 113.6
1933 Female, age 85, both hemispheres 111.8
1990 Female, age 91, right hemisphere 111.1
2018 Male, age 76, both hemispheres 102.7
1850 Male, age 80, both hemispheres 99.6
2693 Female, age 94, both hemispheres 93.0
2250 Female, age 67, right hemisphere 86.8
2692 Male, age 74, both hemispheres 73.2
Perirhinal gyrus
nTPM: 109.1
1794 Male, age 80, right hemisphere 128.3
1841 Female, age 85, right hemisphere 112.8
1847 Female, age 91, left hemisphere 107.9
2848 Male, age 76, right hemisphere 98.9
2521 Female, age 94, right hemisphere 97.5
Subiculum
nTPM: 96.0
1977 Female, age 85, both hemispheres 116.5
2042 Male, age 76, both hemispheres 108.6
2619 Male, age 74, both hemispheres 101.8
2729 Female, age 91, right hemisphere 94.3
1901 Male, age 80, both hemispheres 82.8
2438 Female, age 94, left hemisphere 71.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.3
Samples: 197

Max nTPM: 139.4
Min nTPM: 12.1
Std nTPM: 20.7
Median nTPM: 65.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 139.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 137.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 136.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 122.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 118.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 116.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 112.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 111.1
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 107.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 107.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 105.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 185.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 185.1
FF:10169-103B7 60 years, female 226.4
FF:10153-102I9 76 years, female 143.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 108.8
Pig sample Sample description nTPM
Subiculum
nTPM: 106.9
Samples: 4

Max nTPM: 150.5
Min nTPM: 83.9
Sample A Female 150.5
Sample B Female 97.8
Sample C Male 95.3
Sample D Male 83.9
Dorsal hippocampus
nTPM: 103.9
Samples: 4

Max nTPM: 124.6
Min nTPM: 92.0
Sample A Female 124.6
Sample B Female 102.6
Sample C Male 96.3
Sample D Male 92.0
Entorhinal cortex
nTPM: 92.1
Samples: 4

Max nTPM: 108.1
Min nTPM: 71.6
Sample A Female 93.6
Sample B Female 95.0
Sample C Male 108.1
Sample D Male 71.6
Ventral hippocampus
nTPM: 108.8
Samples: 4

Max nTPM: 149.9
Min nTPM: 74.5
Sample A Female 115.7
Sample B Female 94.9
Sample C Male 149.9
Sample D Male 74.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.0
Samples: 4

Max nTPM: 6.7
Min nTPM: 3.5
Sample A Male 6.7
Sample B Male 6.3
Sample C Female 3.6
Sample D Female 3.5
Hippocampal formation
nTPM: 5.4
Samples: 4

Max nTPM: 6.9
Min nTPM: 3.4
Sample A Male 3.4
Sample B Male 6.8
Sample C Female 4.6
Sample D Female 6.9

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