HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:60.3 nTPM
HPA Brain:273.8 nTPM
GTEx:60.3 nTPM
FANTOM5:178.6 Scaled Tags Per Million
Pig:209.1 nTPM
Mouse:182.1 nTPM
Allen mouse:14.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA078230
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 273.8
Sample id Sample description nTPM
Hippocampus
nTPM: 216.6
1911 Female, age 85, right hemisphere 275.1
2621 Female, age 67, right hemisphere 241.5
1898 Male, age 80, left hemisphere 211.9
2529 Female, age 94, left hemisphere 197.7
2148 Female, age 91, left hemisphere 186.9
1855 Male, age 76, left hemisphere 186.7
Dentate gyrus
nTPM: 213.2
1927 Female, age 91, both hemispheres 253.9
2246 Female, age 85, both hemispheres 235.6
2531 Female, age 67, both hemispheres 225.9
2530 Female, age 94, left hemisphere 210.1
2010 Male, age 76, both hemispheres 205.6
2528 Male, age 74, both hemispheres 148.2
Entorhinal gyrus
nTPM: 262.3
2613 Female, age 94, left hemisphere 288.6
1938 Female, age 85, left hemisphere 288.3
2686 Male, age 75, right hemisphere 272.2
1787 Male, age 76, left hemisphere 253.8
2764 Male, age 80, right hemisphere 252.5
2117 Female, age 91, right hemisphere 218.4
Hippocampus, CA1
nTPM: 243.2
2749 Male, age 80, left hemisphere 356.4
2045 Male, age 76, both hemispheres 245.7
1873 Female, age 85, both hemispheres 218.4
2527 Male, age 74, both hemispheres 215.4
2082 Female, age 91, right hemisphere 179.9
Hippocampus, CA2
nTPM: 214.3
1892 Male, age 76, both hemispheres 257.8
2437 Female, age 94, left hemisphere 244.4
1940 Female, age 85, left hemisphere 202.7
2249 Male, age 74, both hemispheres 198.1
2113 Female, age 91, right hemisphere 192.4
1963 Male, age 80, left hemisphere 190.0
Hippocampus, CA3
nTPM: 237.4
2137 Male, age 80, left hemisphere 374.4
1867 Male, age 76, both hemispheres 252.5
1891 Female, age 85, both hemispheres 245.5
2861 Female, age 67, both hemispheres 205.7
2620 Female, age 94, left hemisphere 188.0
2436 Male, age 74, both hemispheres 158.4
Parahippocampal cortex
nTPM: 254.4
2693 Female, age 94, both hemispheres 282.1
1850 Male, age 80, both hemispheres 281.0
2245 Female, age 91, both hemispheres 275.3
2532 Female, age 72, left hemisphere 268.8
1933 Female, age 85, both hemispheres 266.1
1990 Female, age 91, right hemisphere 246.4
2622 Female, age 67, right hemisphere 239.6
2018 Male, age 76, both hemispheres 231.1
2250 Female, age 67, right hemisphere 229.8
2692 Male, age 74, both hemispheres 223.9
Perirhinal gyrus
nTPM: 273.8
1847 Female, age 91, left hemisphere 298.4
1841 Female, age 85, right hemisphere 289.5
2848 Male, age 76, right hemisphere 279.3
1794 Male, age 80, right hemisphere 261.7
2521 Female, age 94, right hemisphere 239.9
Subiculum
nTPM: 239.5
1901 Male, age 80, both hemispheres 284.2
1977 Female, age 85, both hemispheres 281.9
2438 Female, age 94, left hemisphere 260.6
2042 Male, age 76, both hemispheres 258.1
2619 Male, age 74, both hemispheres 197.5
2729 Female, age 91, right hemisphere 154.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 60.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.3
Samples: 197

Max nTPM: 109.0
Min nTPM: 9.0
Std nTPM: 16.5
Median nTPM: 60.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 109.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 104.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 101.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 101.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 100.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 100.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 95.6
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 92.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 91.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 90.5
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 86.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 178.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 178.6
FF:10169-103B7 60 years, female 192.1
FF:10153-102I9 76 years, female 165.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 209.1
Pig sample Sample description nTPM
Subiculum
nTPM: 173.5
Samples: 4

Max nTPM: 218.0
Min nTPM: 137.0
Sample A Female 218.0
Sample B Female 165.1
Sample C Male 173.7
Sample D Male 137.0
Dorsal hippocampus
nTPM: 209.1
Samples: 4

Max nTPM: 253.6
Min nTPM: 155.9
Sample A Female 253.6
Sample B Female 202.3
Sample C Male 224.7
Sample D Male 155.9
Entorhinal cortex
nTPM: 162.6
Samples: 4

Max nTPM: 170.1
Min nTPM: 157.4
Sample A Female 165.3
Sample B Female 170.1
Sample C Male 157.5
Sample D Male 157.4
Ventral hippocampus
nTPM: 171.9
Samples: 4

Max nTPM: 248.8
Min nTPM: 133.3
Sample A Female 150.0
Sample B Female 133.3
Sample C Male 155.4
Sample D Male 248.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 182.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 167.9
Samples: 4

Max nTPM: 175.2
Min nTPM: 160.6
Sample A Male 160.6
Sample B Male 161.3
Sample C Female 175.2
Sample D Female 174.5
Hippocampal formation
nTPM: 182.1
Samples: 4

Max nTPM: 189.9
Min nTPM: 167.6
Sample A Male 186.3
Sample B Male 184.7
Sample C Female 189.9
Sample D Female 167.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.4
73513603 Antisense, RP_051121_02_D05, Mouse strain C57BL/6J (56 days, male) 23.6
70595787 Antisense, RP_050628_03_B05, Mouse strain C57BL/6J (56 days, male) 5.2
71924481 Antisense, RP_050628_03_B05, Mouse strain C57BL/6J (56 days, male) 3.7

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