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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
164.3
nTPM
FANTOM5:
151.7
Scaled Tags Per Million
Pig:
157.2
nTPM
Allen mouse:
3.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
164.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 136.7
2188
Female, age 91, both hemispheres
171.8
2301
Female, age 85, both hemispheres
134.2
1984
Male, age 76, both hemispheres
124.2
2090
Male, age 80, both hemispheres
116.8
Dorsal cochlear nucleus nTPM: 118.8
2187
Female, age 91, both hemispheres
140.4
2802
Male, age 74, right hemisphere
138.2
2370
Male, age 61, both hemispheres
107.9
2378
Male, age 80, both hemispheres
106.2
2058
Male, age 76, both hemispheres
101.2
Dorsal tegmental nucleus nTPM: 120.2
2326
Male, age 74, both hemispheres
140.3
2083
Male, age 80, both hemispheres
126.5
1936
Male, age 76, left hemisphere
109.4
2358
Male, age 61, both hemispheres
104.7
Dorsolateral tegmental area nTPM: 130.1
2751
Female, age 85, both hemispheres
167.2
2360
Male, age 74, both hemispheres
131.2
2654
Male, age 80, both hemispheres
130.4
2141
Male, age 76, both hemispheres
126.3
2337
Male, age 61, both hemispheres
95.2
Kolliker-Fuse nucleus nTPM: 136.6
2793
Female, age 91, left hemisphere
194.2
2163
Male, age 80, both hemispheres
115.3
2315
Male, age 76, right hemisphere
100.3
Lateral lemniscal nuclei nTPM: 151.0
2320
Female, age 91, left hemisphere
169.8
2036
Male, age 80, both hemispheres
159.8
2453
Male, age 74, right hemisphere
159.6
2169
Male, age 76, both hemispheres
138.7
2746
Female, age 85, left hemisphere
127.4
Lateral parabrachial nucleus nTPM: 137.6
2792
Male, age 76, both hemispheres
177.9
2013
Male, age 80, both hemispheres
133.5
2139
Female, age 85, right hemisphere
124.9
2790
Male, age 61, both hemispheres
114.2
Lateral vestibular nucleus nTPM: 116.8
2311
Male, age 80, both hemispheres
117.4
2184
Male, age 76, both hemispheres
116.2
Locus coeruleus nTPM: 119.7
2720
Male, age 74, both hemispheres
158.8
2162
Male, age 80, both hemispheres
138.1
2788
Male, age 74, unknown
132.6
2014
Male, age 55, unknown
116.5
2317
Female, age 72, unknown
101.5
2123
Female, age 91, both hemispheres
98.5
1980
Male, age 76, both hemispheres
92.2
Medial parabrachial nucleus nTPM: 143.4
2463
Female, age 85, right hemisphere
174.7
2170
Female, age 91, both hemispheres
142.8
2854
Male, age 80, both hemispheres
139.0
2786
Male, age 76, both hemispheres
136.2
2156
Male, age 61, both hemispheres
124.4
Medial periolivary nuclei nTPM: 134.8
2458
Female, age 91, both hemispheres
154.7
2791
Male, age 74, right hemisphere
144.4
2081
Male, age 80, both hemispheres
130.3
2171
Female, age 85, both hemispheres
125.4
2063
Male, age 76, both hemispheres
118.9
Motor facial nucleus nTPM: 142.7
2697
Female, age 85, both hemispheres
174.8
2365
Male, age 74, right hemisphere
160.7
2795
Female, age 91, both hemispheres
139.4
2327
Male, age 80, both hemispheres
138.7
2126
Male, age 61, both hemispheres
125.9
2062
Male, age 76, both hemispheres
117.0
Motor trigeminal nucleus nTPM: 136.3
2560
Male, age 74, both hemispheres
158.9
2321
Female, age 91, both hemispheres
138.1
2079
Male, age 80, both hemispheres
132.8
2309
Male, age 76, both hemispheres
132.1
2335
Male, age 61, both hemispheres
119.7
Nuclei of the trapezoid body nTPM: 136.0
2368
Female, age 91, both hemispheres
155.3
2166
Male, age 80, both hemispheres
149.2
2159
Male, age 61, both hemispheres
133.7
2735
Female, age 85, both hemispheres
122.5
1983
Male, age 76, both hemispheres
119.2
Nucleus raphe magnus nTPM: 138.9
2459
Female, age 91, both hemispheres
167.4
2455
Male, age 74, both hemispheres
145.9
2328
Male, age 80, both hemispheres
143.8
2051
Male, age 76, both hemispheres
131.5
2172
Female, age 85, both hemispheres
130.0
2160
Male, age 61, both hemispheres
114.8
Paramedian reticular nucleus nTPM: 132.0
2052
Male, age 76, both hemispheres
144.0
2050
Female, age 85, both hemispheres
139.7
2313
Male, age 61, both hemispheres
128.8
2057
Male, age 80, both hemispheres
115.7
Pedunculopontine tegmental nucleus nTPM: 135.8
1921
Female, age 85, both hemispheres
150.7
2334
Male, age 80, both hemispheres
135.1
2338
Male, age 61, both hemispheres
121.7
Pontine nuclei nTPM: 144.3
2454
Male, age 74, left hemisphere
185.2
1863
Male, age 55, unknown
172.9
2319
Female, age 91, both hemispheres
164.5
2109
Female, age 72, unknown
148.2
1968
Male, age 76, left hemisphere
130.9
2787
Female, age 85, both hemispheres
121.2
2115
Male, age 80, left hemisphere
119.0
2727
Male, age 61, right hemisphere
112.9
Pontine raphe nucleus nTPM: 128.5
2853
Male, age 76, midline
129.0
2122
Female, age 85, midline
127.9
Posteroventral cochlear nucleus nTPM: 139.5
2135
Female, age 91, both hemispheres
168.7
2070
Male, age 76, both hemispheres
147.9
2341
Male, age 80, both hemispheres
138.9
2371
Male, age 61, both hemispheres
123.1
2752
Female, age 85, both hemispheres
119.0
Principal sensory trigeminal nucleus nTPM: 134.4
2367
Female, age 91, left hemisphere
179.8
2008
Male, age 80, left hemisphere
127.4
2158
Male, age 61, both hemispheres
120.8
2324
Male, age 76, both hemispheres
109.6
Reticular pontine nucleus, caudal nTPM: 157.6
2559
Male, age 74, both hemispheres
185.4
2457
Female, age 91, both hemispheres
170.3
2332
Male, age 80, right hemisphere
140.7
2092
Male, age 76, both hemispheres
133.8
Reticular pontine nucleus, oral nTPM: 164.3
2366
Female, age 91, both hemispheres
199.4
2167
Male, age 76, both hemispheres
171.4
1939
Male, age 80, both hemispheres
155.1
2012
Female, age 85, both hemispheres
151.4
2361
Male, age 74, both hemispheres
144.3
Reticulotegmental nucleus nTPM: 126.7
2452
Male, age 74, both hemispheres
136.5
2322
Female, age 91, both hemispheres
129.5
2325
Male, age 76, both hemispheres
123.6
2333
Male, age 80, both hemispheres
117.4
Spinal trigeminal nucleus, oral nTPM: 127.4
1978
Male, age 76, both hemispheres
160.8
2737
Female, age 85, both hemispheres
114.0
2164
Male, age 80, both hemispheres
107.3
Subcoeruleus area nTPM: 139.4
2369
Female, age 85, left hemisphere
167.2
2451
Male, age 74, both hemispheres
147.6
1958
Male, age 80, both hemispheres
130.0
2323
Female, age 91, left hemisphere
129.1
2089
Male, age 76, left hemisphere
122.9
Superior olive nTPM: 150.9
2020
Male, age 76, both hemispheres
159.2
2561
Female, age 91, both hemispheres
158.0
1875
Female, age 85, both hemispheres
151.1
2364
Male, age 74, right hemisphere
147.5
2329
Male, age 80, right hemisphere
138.9
Ventral periolivary nuclei nTPM: 143.9
2023
Male, age 76, both hemispheres
165.2
2794
Female, age 91, left hemisphere
152.8
2165
Male, age 80, both hemispheres
135.6
2130
Female, age 85, both hemispheres
121.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 139.5
2840
Female, age 85, both hemispheres
151.6
1959
Male, age 76, both hemispheres
145.3
2449
Male, age 74, both hemispheres
138.7
2456
Female, age 91, both hemispheres
138.4
2359
Male, age 61, both hemispheres
133.2
2161
Male, age 80, both hemispheres
129.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
157.2
Pig sample
Sample description
nTPM
Pons nTPM: 157.2
Samples: 4
Max nTPM: 279.0
Min nTPM: 88.7
Sample A
Female
279.0
Sample B
Female
88.7
Sample C
Male
125.7
Sample D
Male
135.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
