HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:29.9 nTPM
HPA Brain:45.9 nTPM
GTEx:29.9 nTPM
FANTOM5:112.1 Scaled Tags Per Million
Pig:24.4 nTPM
Mouse:24.1 nTPM
Allen mouse:3.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023046
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.9
Sample id Sample description nTPM
Hippocampus
nTPM: 45.9
2621 Female, age 67, right hemisphere 66.1
2529 Female, age 94, left hemisphere 48.0
2148 Female, age 91, left hemisphere 45.9
1855 Male, age 76, left hemisphere 39.1
1911 Female, age 85, right hemisphere 38.3
1898 Male, age 80, left hemisphere 37.8
Dentate gyrus
nTPM: 43.0
2530 Female, age 94, left hemisphere 60.6
2531 Female, age 67, both hemispheres 48.1
2246 Female, age 85, both hemispheres 45.1
2010 Male, age 76, both hemispheres 41.3
2528 Male, age 74, both hemispheres 35.6
1927 Female, age 91, both hemispheres 27.3
Entorhinal gyrus
nTPM: 42.7
2613 Female, age 94, left hemisphere 58.3
1787 Male, age 76, left hemisphere 47.3
2117 Female, age 91, right hemisphere 44.0
2764 Male, age 80, right hemisphere 38.8
2686 Male, age 75, right hemisphere 36.9
1938 Female, age 85, left hemisphere 31.0
Hippocampus, CA1
nTPM: 36.1
2045 Male, age 76, both hemispheres 42.6
2527 Male, age 74, both hemispheres 38.1
1873 Female, age 85, both hemispheres 36.3
2082 Female, age 91, right hemisphere 32.8
2749 Male, age 80, left hemisphere 30.7
Hippocampus, CA2
nTPM: 36.4
2437 Female, age 94, left hemisphere 49.1
1940 Female, age 85, left hemisphere 38.5
2113 Female, age 91, right hemisphere 37.7
2249 Male, age 74, both hemispheres 32.8
1963 Male, age 80, left hemisphere 31.8
1892 Male, age 76, both hemispheres 28.4
Hippocampus, CA3
nTPM: 43.7
2861 Female, age 67, both hemispheres 57.4
2620 Female, age 94, left hemisphere 47.4
2436 Male, age 74, both hemispheres 44.2
1891 Female, age 85, both hemispheres 43.0
1867 Male, age 76, both hemispheres 35.6
2137 Male, age 80, left hemisphere 34.8
Parahippocampal cortex
nTPM: 45.4
2532 Female, age 72, left hemisphere 60.7
2622 Female, age 67, right hemisphere 60.3
2245 Female, age 91, both hemispheres 57.4
2018 Male, age 76, both hemispheres 50.0
2692 Male, age 74, both hemispheres 44.9
2250 Female, age 67, right hemisphere 44.7
1990 Female, age 91, right hemisphere 39.2
2693 Female, age 94, both hemispheres 38.7
1933 Female, age 85, both hemispheres 29.6
1850 Male, age 80, both hemispheres 28.6
Perirhinal gyrus
nTPM: 34.0
2848 Male, age 76, right hemisphere 37.4
1847 Female, age 91, left hemisphere 36.4
2521 Female, age 94, right hemisphere 35.3
1841 Female, age 85, right hemisphere 32.1
1794 Male, age 80, right hemisphere 28.9
Subiculum
nTPM: 44.4
2438 Female, age 94, left hemisphere 58.1
2042 Male, age 76, both hemispheres 57.6
2619 Male, age 74, both hemispheres 48.2
1901 Male, age 80, both hemispheres 38.0
2729 Female, age 91, right hemisphere 34.3
1977 Female, age 85, both hemispheres 30.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.9
Samples: 197

Max nTPM: 118.1
Min nTPM: 11.6
Std nTPM: 12.9
Median nTPM: 27.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 118.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 92.5
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 73.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 70.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 63.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 62.3
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 58.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 58.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 57.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 55.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 52.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 112.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 112.1
FF:10169-103B7 60 years, female 132.9
FF:10153-102I9 76 years, female 91.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.4
Pig sample Sample description nTPM
Subiculum
nTPM: 22.1
Samples: 4

Max nTPM: 30.6
Min nTPM: 18.9
Sample A Female 30.6
Sample B Female 19.0
Sample C Male 18.9
Sample D Male 19.8
Dorsal hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 31.2
Min nTPM: 17.1
Sample A Female 31.2
Sample B Female 19.8
Sample C Male 29.6
Sample D Male 17.1
Entorhinal cortex
nTPM: 21.1
Samples: 4

Max nTPM: 22.5
Min nTPM: 18.8
Sample A Female 21.1
Sample B Female 18.8
Sample C Male 22.5
Sample D Male 22.1
Ventral hippocampus
nTPM: 22.6
Samples: 4

Max nTPM: 26.0
Min nTPM: 15.8
Sample A Female 23.8
Sample B Female 15.8
Sample C Male 26.0
Sample D Male 24.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.8
Samples: 4

Max nTPM: 20.5
Min nTPM: 16.8
Sample A Male 20.1
Sample B Male 20.5
Sample C Female 17.9
Sample D Female 16.8
Hippocampal formation
nTPM: 24.2
Samples: 4

Max nTPM: 25.3
Min nTPM: 22.2
Sample A Male 22.2
Sample B Male 24.5
Sample C Female 24.6
Sample D Female 25.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.5
69352908 Antisense, RP_050412_01_D04, Mouse strain C57BL/6J (56 days, male) 3.5

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