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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
27.1
nTPM
HPA Brain:
53.9
nTPM
GTEx:
27.1
nTPM
FANTOM5:
79.2
Scaled Tags Per Million
Pig:
21.1
nTPM
Mouse:
25.0
nTPM
Allen mouse:
3.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
53.9
Sample id
Sample description
nTPM
Amygdala nTPM: 53.9
2814
Male, age 76, right hemisphere
67.9
2695
Female, age 67, right hemisphere
64.7
2514
Male, age 75, right hemisphere
46.5
2517
Female, age 94, left hemisphere
45.9
1987
Female, age 91, left hemisphere
44.6
Basal amygdala nTPM: 47.3
2685
Female, age 94, left hemisphere
58.1
1955
Male, age 76, both hemispheres
49.5
2827
Female, age 67, right hemisphere
48.7
2243
Female, age 91, right hemisphere
47.8
2609
Male, age 75, right hemisphere
43.5
2110
Male, age 80, left hemisphere
35.9
Central amygdala nTPM: 48.0
2701
Female, age 91, right hemisphere
58.2
2826
Female, age 94, left hemisphere
52.8
1905
Male, age 76, both hemispheres
43.6
2239
Male, age 80, left hemisphere
43.5
2515
Male, age 75, right hemisphere
42.0
Corticomedial amygdala nTPM: 40.6
2535
Female, age 67, right hemisphere
48.3
2242
Female, age 91, right hemisphere
45.7
2829
Male, age 80, left hemisphere
40.8
2429
Female, age 94, left hemisphere
38.9
2240
Male, age 76, both hemispheres
36.0
2428
Male, age 75, right hemisphere
34.0
Lateral amygdala nTPM: 50.8
2830
Female, age 67, right hemisphere
60.2
2255
Female, age 91, right hemisphere
58.6
2256
Male, age 80, left hemisphere
57.9
2534
Female, age 94, left hemisphere
53.2
1883
Male, age 76, both hemispheres
41.7
2516
Male, age 75, right hemisphere
33.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
27.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 27.1
Samples: 152
Max nTPM: 93.4
Min nTPM: 10.3
Std nTPM: 11.4
Median nTPM: 24.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
93.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
72.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
68.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
59.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
59.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
51.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
51.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
51.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
51.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
50.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
44.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
41.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
41.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
39.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
39.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
39.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
38.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
38.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
36.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
36.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
35.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
35.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
34.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
34.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
33.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
33.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
32.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
32.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
31.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
31.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
31.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
31.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
31.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
30.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
30.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
30.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
29.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
29.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
29.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
29.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
28.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
28.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
28.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
28.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
28.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
28.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
28.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
28.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
27.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
27.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
27.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
26.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
26.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
26.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
26.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
26.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
26.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
26.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
26.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
26.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
26.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
26.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
26.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
25.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
25.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
25.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
25.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
25.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
25.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
25.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
25.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
25.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
24.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
24.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
24.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
24.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
24.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
24.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
24.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
24.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
24.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
24.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
24.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
24.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
24.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
24.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
24.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
23.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
23.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
23.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
23.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
23.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
23.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
23.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
22.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
22.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
22.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
22.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
22.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
22.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
22.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
22.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
22.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
22.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
21.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
21.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
21.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
21.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
21.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
21.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
21.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
21.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
21.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
21.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
20.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
20.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
20.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
20.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
20.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
20.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
19.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
19.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
19.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
18.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
18.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
18.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
18.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
18.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
18.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
17.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
17.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
17.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
17.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
17.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
17.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
17.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
17.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
17.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
17.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
16.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
16.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
16.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
15.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
15.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
15.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
14.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
14.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
13.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
13.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
13.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
13.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
10.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
25.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 25.0
Samples: 4
Max nTPM: 28.0
Min nTPM: 22.5
Sample A
Male
24.5
Sample B
Male
25.1
Sample C
Female
28.0
Sample D
Female
22.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.