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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
143.3
nTPM
FANTOM5:
197.3
Scaled Tags Per Million
Pig:
1.0
nTPM
Allen mouse:
2.9
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
143.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 122.9
2090
Male, age 80, both hemispheres
133.6
2301
Female, age 85, both hemispheres
126.5
1984
Male, age 76, both hemispheres
119.2
2188
Female, age 91, both hemispheres
112.4
Dorsal cochlear nucleus nTPM: 122.7
2378
Male, age 80, both hemispheres
141.9
2802
Male, age 74, right hemisphere
121.8
2370
Male, age 61, both hemispheres
121.6
2058
Male, age 76, both hemispheres
117.8
2187
Female, age 91, both hemispheres
110.2
Dorsal tegmental nucleus nTPM: 140.5
1936
Male, age 76, left hemisphere
165.4
2326
Male, age 74, both hemispheres
140.3
2083
Male, age 80, both hemispheres
134.9
2358
Male, age 61, both hemispheres
121.3
Dorsolateral tegmental area nTPM: 139.0
2360
Male, age 74, both hemispheres
148.0
2654
Male, age 80, both hemispheres
141.4
2141
Male, age 76, both hemispheres
139.2
2751
Female, age 85, both hemispheres
138.7
2337
Male, age 61, both hemispheres
127.8
Kolliker-Fuse nucleus nTPM: 135.2
2315
Male, age 76, right hemisphere
188.1
2163
Male, age 80, both hemispheres
119.4
2793
Female, age 91, left hemisphere
98.3
Lateral lemniscal nuclei nTPM: 96.1
2169
Male, age 76, both hemispheres
114.1
2453
Male, age 74, right hemisphere
99.5
2746
Female, age 85, left hemisphere
95.6
2320
Female, age 91, left hemisphere
85.9
2036
Male, age 80, both hemispheres
85.7
Lateral parabrachial nucleus nTPM: 131.4
2792
Male, age 76, both hemispheres
165.4
2139
Female, age 85, right hemisphere
139.4
2013
Male, age 80, both hemispheres
136.7
2790
Male, age 61, both hemispheres
84.0
Lateral vestibular nucleus nTPM: 143.3
2311
Male, age 80, both hemispheres
153.0
2184
Male, age 76, both hemispheres
133.5
Locus coeruleus nTPM: 121.2
2317
Female, age 72, unknown
148.3
2788
Male, age 74, unknown
135.4
2123
Female, age 91, both hemispheres
125.9
2014
Male, age 55, unknown
123.1
2162
Male, age 80, both hemispheres
114.8
1980
Male, age 76, both hemispheres
105.7
2720
Male, age 74, both hemispheres
95.2
Medial parabrachial nucleus nTPM: 118.3
2786
Male, age 76, both hemispheres
129.6
2463
Female, age 85, right hemisphere
123.5
2156
Male, age 61, both hemispheres
117.3
2854
Male, age 80, both hemispheres
112.1
2170
Female, age 91, both hemispheres
108.9
Medial periolivary nuclei nTPM: 107.6
2791
Male, age 74, right hemisphere
123.1
2063
Male, age 76, both hemispheres
111.4
2171
Female, age 85, both hemispheres
107.2
2081
Male, age 80, both hemispheres
99.5
2458
Female, age 91, both hemispheres
96.6
Motor facial nucleus nTPM: 109.7
2795
Female, age 91, both hemispheres
134.9
2365
Male, age 74, right hemisphere
123.8
2062
Male, age 76, both hemispheres
118.3
2126
Male, age 61, both hemispheres
105.7
2697
Female, age 85, both hemispheres
100.7
2327
Male, age 80, both hemispheres
74.8
Motor trigeminal nucleus nTPM: 105.2
2309
Male, age 76, both hemispheres
131.8
2335
Male, age 61, both hemispheres
127.6
2321
Female, age 91, both hemispheres
95.8
2560
Male, age 74, both hemispheres
89.9
2079
Male, age 80, both hemispheres
80.8
Nuclei of the trapezoid body nTPM: 104.5
1983
Male, age 76, both hemispheres
123.6
2368
Female, age 91, both hemispheres
105.6
2159
Male, age 61, both hemispheres
101.7
2166
Male, age 80, both hemispheres
98.2
2735
Female, age 85, both hemispheres
93.6
Nucleus raphe magnus nTPM: 99.0
2051
Male, age 76, both hemispheres
122.1
2455
Male, age 74, both hemispheres
116.7
2328
Male, age 80, both hemispheres
98.5
2160
Male, age 61, both hemispheres
95.5
2459
Female, age 91, both hemispheres
85.6
2172
Female, age 85, both hemispheres
75.3
Paramedian reticular nucleus nTPM: 119.2
2052
Male, age 76, both hemispheres
136.4
2057
Male, age 80, both hemispheres
126.3
2050
Female, age 85, both hemispheres
107.7
2313
Male, age 61, both hemispheres
106.4
Pedunculopontine tegmental nucleus nTPM: 139.9
2338
Male, age 61, both hemispheres
152.4
1921
Female, age 85, both hemispheres
136.8
2334
Male, age 80, both hemispheres
130.5
Pontine nuclei nTPM: 91.7
1863
Male, age 55, unknown
106.9
2115
Male, age 80, left hemisphere
106.1
1968
Male, age 76, left hemisphere
101.3
2319
Female, age 91, both hemispheres
97.9
2787
Female, age 85, both hemispheres
83.4
2454
Male, age 74, left hemisphere
80.4
2109
Female, age 72, unknown
79.9
2727
Male, age 61, right hemisphere
77.7
Pontine raphe nucleus nTPM: 123.0
2853
Male, age 76, midline
151.7
2122
Female, age 85, midline
94.2
Posteroventral cochlear nucleus nTPM: 123.3
2371
Male, age 61, both hemispheres
137.3
2341
Male, age 80, both hemispheres
132.3
2070
Male, age 76, both hemispheres
119.2
2752
Female, age 85, both hemispheres
116.8
2135
Female, age 91, both hemispheres
110.7
Principal sensory trigeminal nucleus nTPM: 104.1
2324
Male, age 76, both hemispheres
147.8
2158
Male, age 61, both hemispheres
96.8
2367
Female, age 91, left hemisphere
90.0
2008
Male, age 80, left hemisphere
81.6
Reticular pontine nucleus, caudal nTPM: 97.2
2092
Male, age 76, both hemispheres
130.7
2457
Female, age 91, both hemispheres
99.7
2559
Male, age 74, both hemispheres
83.2
2332
Male, age 80, right hemisphere
75.3
Reticular pontine nucleus, oral nTPM: 117.3
2167
Male, age 76, both hemispheres
151.6
1939
Male, age 80, both hemispheres
146.5
2012
Female, age 85, both hemispheres
110.8
2366
Female, age 91, both hemispheres
100.9
2361
Male, age 74, both hemispheres
76.6
Reticulotegmental nucleus nTPM: 121.5
2333
Male, age 80, both hemispheres
131.8
2325
Male, age 76, both hemispheres
126.7
2322
Female, age 91, both hemispheres
118.0
2452
Male, age 74, both hemispheres
109.3
Spinal trigeminal nucleus, oral nTPM: 116.8
1978
Male, age 76, both hemispheres
126.3
2737
Female, age 85, both hemispheres
117.0
2164
Male, age 80, both hemispheres
107.0
Subcoeruleus area nTPM: 120.8
2369
Female, age 85, left hemisphere
152.4
1958
Male, age 80, both hemispheres
124.2
2323
Female, age 91, left hemisphere
112.8
2451
Male, age 74, both hemispheres
112.5
2089
Male, age 76, left hemisphere
101.9
Superior olive nTPM: 105.1
2020
Male, age 76, both hemispheres
121.9
2364
Male, age 74, right hemisphere
116.6
2561
Female, age 91, both hemispheres
100.2
2329
Male, age 80, right hemisphere
100.0
1875
Female, age 85, both hemispheres
86.8
Ventral periolivary nuclei nTPM: 105.3
2023
Male, age 76, both hemispheres
115.4
2165
Male, age 80, both hemispheres
111.7
2130
Female, age 85, both hemispheres
107.5
2794
Female, age 91, left hemisphere
86.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 120.4
2359
Male, age 61, both hemispheres
181.3
2840
Female, age 85, both hemispheres
123.9
1959
Male, age 76, both hemispheres
114.6
2161
Male, age 80, both hemispheres
103.4
2456
Female, age 91, both hemispheres
103.1
2449
Male, age 74, both hemispheres
95.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1.0
Pig sample
Sample description
nTPM
Pons nTPM: 1.0
Samples: 4
Max nTPM: 2.0
Min nTPM: 0.5
Sample A
Female
2.0
Sample B
Female
0.5
Sample C
Male
0.8
Sample D
Male
0.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
