HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:387.3 nTPM
HPA Brain:688.7 nTPM
GTEx:387.3 nTPM
FANTOM5:1230.5 Scaled Tags Per Million
Pig:620.5 nTPM
Mouse:1393.6 nTPM
Allen mouse:25.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 688.7
Sample id Sample description nTPM
Hippocampus
nTPM: 551.6
1898 Male, age 80, left hemisphere 678.0
1855 Male, age 76, left hemisphere 654.1
2621 Female, age 67, right hemisphere 648.7
2148 Female, age 91, left hemisphere 469.5
1911 Female, age 85, right hemisphere 432.4
2529 Female, age 94, left hemisphere 426.8
Dentate gyrus
nTPM: 562.3
2530 Female, age 94, left hemisphere 700.3
1927 Female, age 91, both hemispheres 639.1
2010 Male, age 76, both hemispheres 614.3
2246 Female, age 85, both hemispheres 538.0
2531 Female, age 67, both hemispheres 445.1
2528 Male, age 74, both hemispheres 436.9
Entorhinal gyrus
nTPM: 550.6
2613 Female, age 94, left hemisphere 637.8
2764 Male, age 80, right hemisphere 625.7
1787 Male, age 76, left hemisphere 614.7
1938 Female, age 85, left hemisphere 592.4
2117 Female, age 91, right hemisphere 449.3
2686 Male, age 75, right hemisphere 383.7
Hippocampus, CA1
nTPM: 633.3
2749 Male, age 80, left hemisphere 1028.0
1873 Female, age 85, both hemispheres 591.8
2045 Male, age 76, both hemispheres 562.7
2527 Male, age 74, both hemispheres 510.4
2082 Female, age 91, right hemisphere 473.5
Hippocampus, CA2
nTPM: 539.5
1892 Male, age 76, both hemispheres 711.7
1963 Male, age 80, left hemisphere 615.4
1940 Female, age 85, left hemisphere 513.7
2437 Female, age 94, left hemisphere 497.8
2249 Male, age 74, both hemispheres 452.2
2113 Female, age 91, right hemisphere 446.3
Hippocampus, CA3
nTPM: 556.8
2137 Male, age 80, left hemisphere 744.3
2620 Female, age 94, left hemisphere 597.9
1867 Male, age 76, both hemispheres 560.7
2436 Male, age 74, both hemispheres 534.7
2861 Female, age 67, both hemispheres 506.6
1891 Female, age 85, both hemispheres 396.2
Parahippocampal cortex
nTPM: 552.1
2245 Female, age 91, both hemispheres 704.4
1850 Male, age 80, both hemispheres 626.8
2250 Female, age 67, right hemisphere 609.4
2532 Female, age 72, left hemisphere 597.5
1990 Female, age 91, right hemisphere 560.3
1933 Female, age 85, both hemispheres 543.2
2018 Male, age 76, both hemispheres 533.8
2693 Female, age 94, both hemispheres 483.2
2622 Female, age 67, right hemisphere 457.6
2692 Male, age 74, both hemispheres 405.0
Perirhinal gyrus
nTPM: 688.7
1794 Male, age 80, right hemisphere 801.1
1847 Female, age 91, left hemisphere 781.4
2521 Female, age 94, right hemisphere 685.9
1841 Female, age 85, right hemisphere 619.7
2848 Male, age 76, right hemisphere 555.5
Subiculum
nTPM: 485.5
1977 Female, age 85, both hemispheres 564.8
1901 Male, age 80, both hemispheres 545.7
2619 Male, age 74, both hemispheres 523.7
2438 Female, age 94, left hemisphere 486.5
2042 Male, age 76, both hemispheres 451.4
2729 Female, age 91, right hemisphere 340.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 387.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 387.3
Samples: 197

Max nTPM: 949.4
Min nTPM: 89.6
Std nTPM: 173.9
Median nTPM: 363.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 949.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 897.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 853.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 840.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 823.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 809.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 802.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 759.0
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 736.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 733.5
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 725.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1230.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1230.5
FF:10169-103B7 60 years, female 1590.0
FF:10153-102I9 76 years, female 870.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 620.5
Pig sample Sample description nTPM
Subiculum
nTPM: 553.7
Samples: 4

Max nTPM: 719.2
Min nTPM: 454.1
Sample A Female 719.2
Sample B Female 454.1
Sample C Male 570.5
Sample D Male 470.8
Dorsal hippocampus
nTPM: 597.9
Samples: 4

Max nTPM: 791.7
Min nTPM: 451.1
Sample A Female 791.7
Sample B Female 592.0
Sample C Male 556.6
Sample D Male 451.1
Entorhinal cortex
nTPM: 575.6
Samples: 4

Max nTPM: 644.1
Min nTPM: 482.2
Sample A Female 644.1
Sample B Female 482.2
Sample C Male 608.5
Sample D Male 567.7
Ventral hippocampus
nTPM: 620.5
Samples: 4

Max nTPM: 851.5
Min nTPM: 364.9
Sample A Female 633.9
Sample B Female 364.9
Sample C Male 851.5
Sample D Male 631.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1393.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1393.7
Samples: 4

Max nTPM: 1656.6
Min nTPM: 1253.6
Sample A Male 1253.6
Sample B Male 1397.2
Sample C Female 1267.2
Sample D Female 1656.6
Hippocampal formation
nTPM: 1325.5
Samples: 4

Max nTPM: 1398.4
Min nTPM: 1280.2
Sample A Male 1280.2
Sample B Male 1314.5
Sample C Female 1308.9
Sample D Female 1398.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 25.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 25.0
69526976 Antisense, RP_050421_02_A08, Mouse strain C57BL/6J (56 days, male) 25.7
74881559 Antisense, RP_060315_04_C11, Mouse strain C57BL/6J (56 days, male) 24.3

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