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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
578.8
nTPM
FANTOM5:
1450.1
Scaled Tags Per Million
Pig:
648.1
nTPM
Allen mouse:
15.2
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
578.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 385.8
2301
Female, age 85, both hemispheres
447.9
2188
Female, age 91, both hemispheres
383.4
1984
Male, age 76, both hemispheres
375.7
2090
Male, age 80, both hemispheres
336.3
Dorsal cochlear nucleus nTPM: 361.3
2187
Female, age 91, both hemispheres
454.9
2370
Male, age 61, both hemispheres
371.8
2058
Male, age 76, both hemispheres
363.2
2802
Male, age 74, right hemisphere
321.3
2378
Male, age 80, both hemispheres
295.1
Dorsal tegmental nucleus nTPM: 432.6
2358
Male, age 61, both hemispheres
531.6
2083
Male, age 80, both hemispheres
456.6
2326
Male, age 74, both hemispheres
374.5
1936
Male, age 76, left hemisphere
367.8
Dorsolateral tegmental area nTPM: 418.7
2337
Male, age 61, both hemispheres
466.0
2141
Male, age 76, both hemispheres
465.2
2751
Female, age 85, both hemispheres
411.1
2654
Male, age 80, both hemispheres
408.5
2360
Male, age 74, both hemispheres
342.6
Kolliker-Fuse nucleus nTPM: 423.5
2163
Male, age 80, both hemispheres
491.0
2793
Female, age 91, left hemisphere
460.8
2315
Male, age 76, right hemisphere
318.8
Lateral lemniscal nuclei nTPM: 489.7
2169
Male, age 76, both hemispheres
577.2
2036
Male, age 80, both hemispheres
532.7
2746
Female, age 85, left hemisphere
490.7
2453
Male, age 74, right hemisphere
473.7
2320
Female, age 91, left hemisphere
374.0
Lateral parabrachial nucleus nTPM: 417.6
2139
Female, age 85, right hemisphere
570.1
2790
Male, age 61, both hemispheres
399.4
2013
Male, age 80, both hemispheres
390.4
2792
Male, age 76, both hemispheres
310.3
Lateral vestibular nucleus nTPM: 470.7
2184
Male, age 76, both hemispheres
491.2
2311
Male, age 80, both hemispheres
450.1
Locus coeruleus nTPM: 578.8
2123
Female, age 91, both hemispheres
770.6
2014
Male, age 55, unknown
627.0
2720
Male, age 74, both hemispheres
621.4
1980
Male, age 76, both hemispheres
569.4
2162
Male, age 80, both hemispheres
543.5
2317
Female, age 72, unknown
532.4
2788
Male, age 74, unknown
387.6
Medial parabrachial nucleus nTPM: 457.3
2170
Female, age 91, both hemispheres
557.3
2854
Male, age 80, both hemispheres
514.7
2156
Male, age 61, both hemispheres
460.0
2786
Male, age 76, both hemispheres
413.9
2463
Female, age 85, right hemisphere
341.0
Medial periolivary nuclei nTPM: 451.8
2171
Female, age 85, both hemispheres
664.6
2063
Male, age 76, both hemispheres
522.4
2791
Male, age 74, right hemisphere
404.9
2081
Male, age 80, both hemispheres
337.7
2458
Female, age 91, both hemispheres
329.6
Motor facial nucleus nTPM: 467.5
2062
Male, age 76, both hemispheres
562.8
2697
Female, age 85, both hemispheres
523.2
2365
Male, age 74, right hemisphere
500.0
2327
Male, age 80, both hemispheres
462.8
2126
Male, age 61, both hemispheres
402.0
2795
Female, age 91, both hemispheres
354.3
Motor trigeminal nucleus nTPM: 433.8
2335
Male, age 61, both hemispheres
500.3
2079
Male, age 80, both hemispheres
472.2
2560
Male, age 74, both hemispheres
466.1
2309
Male, age 76, both hemispheres
378.1
2321
Female, age 91, both hemispheres
352.3
Nuclei of the trapezoid body nTPM: 500.2
2159
Male, age 61, both hemispheres
611.2
2735
Female, age 85, both hemispheres
591.4
1983
Male, age 76, both hemispheres
566.5
2166
Male, age 80, both hemispheres
403.4
2368
Female, age 91, both hemispheres
328.6
Nucleus raphe magnus nTPM: 552.2
2160
Male, age 61, both hemispheres
739.0
2172
Female, age 85, both hemispheres
718.0
2455
Male, age 74, both hemispheres
588.3
2328
Male, age 80, both hemispheres
459.0
2051
Male, age 76, both hemispheres
448.1
2459
Female, age 91, both hemispheres
360.9
Paramedian reticular nucleus nTPM: 455.7
2050
Female, age 85, both hemispheres
569.7
2313
Male, age 61, both hemispheres
517.1
2057
Male, age 80, both hemispheres
455.3
2052
Male, age 76, both hemispheres
280.7
Pedunculopontine tegmental nucleus nTPM: 453.3
2334
Male, age 80, both hemispheres
484.4
1921
Female, age 85, both hemispheres
452.5
2338
Male, age 61, both hemispheres
422.9
Pontine nuclei nTPM: 532.8
2787
Female, age 85, both hemispheres
796.3
1863
Male, age 55, unknown
665.5
2109
Female, age 72, unknown
555.2
2727
Male, age 61, right hemisphere
520.5
1968
Male, age 76, left hemisphere
517.4
2454
Male, age 74, left hemisphere
437.0
2319
Female, age 91, both hemispheres
391.2
2115
Male, age 80, left hemisphere
379.1
Pontine raphe nucleus nTPM: 508.9
2122
Female, age 85, midline
543.0
2853
Male, age 76, midline
474.7
Posteroventral cochlear nucleus nTPM: 372.7
2752
Female, age 85, both hemispheres
484.5
2070
Male, age 76, both hemispheres
424.4
2371
Male, age 61, both hemispheres
379.9
2135
Female, age 91, both hemispheres
298.9
2341
Male, age 80, both hemispheres
275.8
Principal sensory trigeminal nucleus nTPM: 493.8
2158
Male, age 61, both hemispheres
659.4
2324
Male, age 76, both hemispheres
491.4
2008
Male, age 80, left hemisphere
443.9
2367
Female, age 91, left hemisphere
380.6
Reticular pontine nucleus, caudal nTPM: 418.8
2332
Male, age 80, right hemisphere
496.6
2092
Male, age 76, both hemispheres
460.2
2559
Male, age 74, both hemispheres
384.5
2457
Female, age 91, both hemispheres
333.7
Reticular pontine nucleus, oral nTPM: 423.3
2012
Female, age 85, both hemispheres
469.7
2167
Male, age 76, both hemispheres
445.5
1939
Male, age 80, both hemispheres
431.6
2361
Male, age 74, both hemispheres
416.9
2366
Female, age 91, both hemispheres
353.0
Reticulotegmental nucleus nTPM: 455.7
2325
Male, age 76, both hemispheres
514.6
2452
Male, age 74, both hemispheres
444.7
2333
Male, age 80, both hemispheres
436.5
2322
Female, age 91, both hemispheres
427.0
Spinal trigeminal nucleus, oral nTPM: 449.1
2164
Male, age 80, both hemispheres
479.2
2737
Female, age 85, both hemispheres
445.4
1978
Male, age 76, both hemispheres
422.5
Subcoeruleus area nTPM: 450.7
2323
Female, age 91, left hemisphere
617.1
1958
Male, age 80, both hemispheres
461.9
2089
Male, age 76, left hemisphere
431.0
2451
Male, age 74, both hemispheres
391.1
2369
Female, age 85, left hemisphere
352.2
Superior olive nTPM: 448.0
1875
Female, age 85, both hemispheres
551.2
2364
Male, age 74, right hemisphere
472.4
2329
Male, age 80, right hemisphere
434.5
2561
Female, age 91, both hemispheres
393.9
2020
Male, age 76, both hemispheres
388.1
Ventral periolivary nuclei nTPM: 476.0
2130
Female, age 85, both hemispheres
641.0
2165
Male, age 80, both hemispheres
525.3
2023
Male, age 76, both hemispheres
376.4
2794
Female, age 91, left hemisphere
361.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 460.8
2840
Female, age 85, both hemispheres
550.9
2359
Male, age 61, both hemispheres
512.3
2449
Male, age 74, both hemispheres
501.5
1959
Male, age 76, both hemispheres
443.4
2161
Male, age 80, both hemispheres
434.6
2456
Female, age 91, both hemispheres
322.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
648.1
Pig sample
Sample description
nTPM
Pons nTPM: 648.1
Samples: 4
Max nTPM: 927.3
Min nTPM: 469.6
Sample A
Female
927.3
Sample B
Female
469.6
Sample C
Male
546.3
Sample D
Male
649.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
